Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0567 |
Symbol | |
ID | 8018193 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 603194 |
End bp | 603766 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644829346 |
Product | hypothetical protein |
Protein accession | YP_002980544 |
Protein GI | 241662184 |
COG category | [K] Transcription |
COG ID | [COG1678] Putative transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.7379 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTCGC CTGACGCACT TATCAATCTC ACGAATCAGT TCCTGATCGC TATGCCCGGC ATGGCGGACT CCACGTTTTC GGGCACGGTC GTGTACATGT GCGAGCACAA CGAGCGCGGT GCGCTTGGGC TCGTCATCAA CCGCCCCATC GACATCGACT TGGCGACGCT GTTCGACAAG ATCGACCTCA AGCTCGAAAT CCACCCTCTC GCAGAACAAT CCGTGTACTA CGGCGGCCCG GTGCAGACCG AGCGCGGGTT TGTGCTGCAC GACGCCACGG GCGCGTATTC GTCGTCGCTG GCGGTGCCGG GCGGGCTGGA AATGACCACC TCCAAGGATG TGCTGGAAGC CGTCGCCCAG GGCGGCGGCC CCCACCGTTT CATCCTGACC CTCGGGTATG CCGGCTGGAG TGCCGGCCAA CTGGAAGACG AAATCAGTCG CAACGGCTGG CTGACCGTCC AGGCCGATCC CGAGATCATC TTCAACGTGC CTCCCGAAGC GCGGTTTGCC GCGGCACTGA ATCTGCTCGG CATCAACCCC GCCATGCTGT CGGGTGAGGC CGGGCATGCC TGA
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Protein sequence | MASPDALINL TNQFLIAMPG MADSTFSGTV VYMCEHNERG ALGLVINRPI DIDLATLFDK IDLKLEIHPL AEQSVYYGGP VQTERGFVLH DATGAYSSSL AVPGGLEMTT SKDVLEAVAQ GGGPHRFILT LGYAGWSAGQ LEDEISRNGW LTVQADPEII FNVPPEARFA AALNLLGINP AMLSGEAGHA
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