Gene Rpic12D_0567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0567 
Symbol 
ID8018193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp603194 
End bp603766 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content64% 
IMG OID644829346 
Producthypothetical protein 
Protein accessionYP_002980544 
Protein GI241662184 
COG category[K] Transcription 
COG ID[COG1678] Putative transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.7379 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTCGC CTGACGCACT TATCAATCTC ACGAATCAGT TCCTGATCGC TATGCCCGGC 
ATGGCGGACT CCACGTTTTC GGGCACGGTC GTGTACATGT GCGAGCACAA CGAGCGCGGT
GCGCTTGGGC TCGTCATCAA CCGCCCCATC GACATCGACT TGGCGACGCT GTTCGACAAG
ATCGACCTCA AGCTCGAAAT CCACCCTCTC GCAGAACAAT CCGTGTACTA CGGCGGCCCG
GTGCAGACCG AGCGCGGGTT TGTGCTGCAC GACGCCACGG GCGCGTATTC GTCGTCGCTG
GCGGTGCCGG GCGGGCTGGA AATGACCACC TCCAAGGATG TGCTGGAAGC CGTCGCCCAG
GGCGGCGGCC CCCACCGTTT CATCCTGACC CTCGGGTATG CCGGCTGGAG TGCCGGCCAA
CTGGAAGACG AAATCAGTCG CAACGGCTGG CTGACCGTCC AGGCCGATCC CGAGATCATC
TTCAACGTGC CTCCCGAAGC GCGGTTTGCC GCGGCACTGA ATCTGCTCGG CATCAACCCC
GCCATGCTGT CGGGTGAGGC CGGGCATGCC TGA
 
Protein sequence
MASPDALINL TNQFLIAMPG MADSTFSGTV VYMCEHNERG ALGLVINRPI DIDLATLFDK 
IDLKLEIHPL AEQSVYYGGP VQTERGFVLH DATGAYSSSL AVPGGLEMTT SKDVLEAVAQ
GGGPHRFILT LGYAGWSAGQ LEDEISRNGW LTVQADPEII FNVPPEARFA AALNLLGINP
AMLSGEAGHA