Gene Rpic12D_0562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0562 
Symbol 
ID8018188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp591472 
End bp592017 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content69% 
IMG OID644829341 
ProductCheW protein 
Protein accessionYP_002980539 
Protein GI241662179 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.770084 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGAAC AGCGCACCAA CCTGACCTCC CGCCAGCGCC TGCACGAATA CCAGGCGATG 
CTGGCCCGCC GCCTGCAGGA GGCGCGCGCC AAGTCGGCGA CGGAAGGCTT TCTGGGCGTG
CAGATCGGCG AGCACCACTG GCTGCTGTCG CTGACCGAAA CCGGCGAGGT GCTGGACTAC
CAGCCGCCCG CACGCGTGCC GCTCACACAG CCGTGGTACC TCGGTCTCGT GAACGCGCGC
GGCAATCTGC TCGGCGTGAT CGATTTCGGC CTGTTCTGCG GTGAAGCGCC GACGAGCAGT
GGCAGCGGCG CCAAGATCGT GGTGCTGTCC AAAGACCCGC AGCGTGCGTG CGCGATTCTC
GTGCCGCGCG TGGCCGGCCT GCGCAGCCTG AGCGATCTGC AGCCTGCGGA AGCCACGGCG
GAAGAGGGGC GCCCGTGGTT GGGACGCGCC TGGAGCGATG CGCAGGGCAC GCAATGGCGC
GAACTGGATG TGCGGCAGTT GCTGGCCGAT CCGGCGTTCC TGCAGGTCGG TCGCAGCCGC
ACGTAA
 
Protein sequence
MNEQRTNLTS RQRLHEYQAM LARRLQEARA KSATEGFLGV QIGEHHWLLS LTETGEVLDY 
QPPARVPLTQ PWYLGLVNAR GNLLGVIDFG LFCGEAPTSS GSGAKIVVLS KDPQRACAIL
VPRVAGLRSL SDLQPAEATA EEGRPWLGRA WSDAQGTQWR ELDVRQLLAD PAFLQVGRSR
T