Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0549 |
Symbol | |
ID | 8018175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 581590 |
End bp | 582441 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644829328 |
Product | Flp pilus assembly protein CpaB |
Protein accession | YP_002980526 |
Protein GI | 241662166 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3745] Flp pilus assembly protein CpaB |
TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAACC TGCGCATCCT TTCCATGCTG CTCATTGCCA CGATTGCCGC GCTTGCGGCG GTGGCCTTCG CGTCGCGCTG GCTGACGCAG CAAAGCGGCA GCGGCATCAC CAAGATCGCG GTCGCGGCGA CGGACATCGA TCTGGGCCAG CGCCTGTCGC CCGAGGCCAT CAAGCTGGTC GATTGGCCAG CCTCCAGCCT GCCCCCGGGG GCGATCAACG ACCCGCACGC GCTGGATGGC CGCGTTGTGC GCGCCAGCCT CACGCGCGGC GAGCCGGTGC TCGACTCCAA GCTGACGCCG GTCGGGACAG CAGGCGGTCT GTCAGCCGTG ATCGCCGAAG GCAAGCGCGC GATCACCGTA CGGGTCAATG ACGTGGTGGG CGTGGCGGGC TTCGCATTGC CGGGCAGCTA CGTCGACATC ATCGTCAACA CGCAGCAGGA CTCCAGGGAA GCCAAGCCTG GCGCCGATCG CAATGACCAG TCGATCTCGA AGATCGTGCT GGAAAAGATT CTCGTGCTGG CTGTGGCCCA GGAGGTCAAC CGCGACGACA CCAAGCCCAA GGTCGTCAAT GCCGTCACGC TGGAAGTCAC GCCGGAGCAG GCCGAGAAGA TCGATCTGGC ACGCAGCGTC GGCAATCTCT CGCTGGTATT GCGCAACCAA GTGGACTCGC AGCATGACGT CACTGCCGGC GCCACCAAGA GCACGCTCCT CAAAGAGCCC GTCGTGAGCA CGGCCGTGGC GGTGCCAGTG GTGAAGACGG TGCAGATCGT GCATCGCGTG GCCGAGCGTC GGTCCGCAGG CAACTGCGTG GGCGTGATCA ACGGCGTGCA GCACAGCCAA GAGTGCTTCT GA
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Protein sequence | MKNLRILSML LIATIAALAA VAFASRWLTQ QSGSGITKIA VAATDIDLGQ RLSPEAIKLV DWPASSLPPG AINDPHALDG RVVRASLTRG EPVLDSKLTP VGTAGGLSAV IAEGKRAITV RVNDVVGVAG FALPGSYVDI IVNTQQDSRE AKPGADRNDQ SISKIVLEKI LVLAVAQEVN RDDTKPKVVN AVTLEVTPEQ AEKIDLARSV GNLSLVLRNQ VDSQHDVTAG ATKSTLLKEP VVSTAVAVPV VKTVQIVHRV AERRSAGNCV GVINGVQHSQ ECF
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