| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0544 |
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| Symbol | |
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| ID | 8018170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 575671 |
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| End bp | 576648 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644829323 |
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| Product | type II secretion system protein |
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| Protein accession | YP_002980521 |
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| Protein GI | 241662161 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.106661 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCCGC TTGTGATCGG TTTTGCGCTG TCGGTCTTCA TCGCCATGAT GCTGGCCGTG
TTGGCCGTCT ATCTGTGGTG GGATACCCGG CACAGCTCGG CGGCACGGCG TTTCAGCCAC
CGCTTGAAGA TGGCACTCGC CAGCAGTGTC AGCCACGGAG GCACCGACAG CATCCTCAAG
CAGCGCATGC TGAGTGAGTC CCCGGAAGTG GCGGCGATGC TCGGCCGACT GCCGCGCATC
CAGACGCTGG ACCGCCGACT GCTGCAGTCC GGCCTTGATT GGTCGGTCTC GCGCTTCTTT
GCATTGACGC TGATGGTGCC GGCAATGATC GCCATCGTTT TCTCGTTGTT CGACCCGCCC
CCAATGACGC TGCTGGTGTT CGTGCTCGCC GGAGCATCCT TGCCTGCGCT CTATGTCATG
CATCGTCGTA CCCGGCGCCT GCTCAAGCTG GAAGCGCAGT TGCCCGAAGC CACGGACCTC
ATCAGCCGCG CGCTGCGGGC GGGTCACTCA CTGCCCGCAG CACTCGAGAT GGCCGGGACC
GAGTTGCCCG CCCCCATCGG TGCGGAACTG GCCATCGTCT TCAGCCAGAT CAACTTTGGC
GTTTCGATGA GCGACGCGTT TGCGGGGCTC ACCGACCGCG TTCCGGTGGA TGACCTGCGC
TACCTCGTCA TCGCCATCCT GATCCAGCGT GAATCTGGCG GCAACCTGGC AGAGATCCTG
GACAACGTGG GAAAACTGAT TCGCAAGCGC CTGCAATTGC TGGACAAGGT TCGCGTGCTG
TCCGCCGAAG GCCGCCTGGG CGGCTGGATT CTGACCTTGC TCCCGCCCGT CATGGGCCTG
GCGATCTACC TGCTGAACCC TGAGTTGATG TCGACGCTGT GGACCACCGA TGCAGGAATT
CGTCTGCTGT GGTTCGCCAT CACCATGACA TGCCTGGGCA TGCTGTGGAT CCGGCAGATC
GTCCGCATCC ATATCTGA
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| Protein sequence | MDPLVIGFAL SVFIAMMLAV LAVYLWWDTR HSSAARRFSH RLKMALASSV SHGGTDSILK
QRMLSESPEV AAMLGRLPRI QTLDRRLLQS GLDWSVSRFF ALTLMVPAMI AIVFSLFDPP
PMTLLVFVLA GASLPALYVM HRRTRRLLKL EAQLPEATDL ISRALRAGHS LPAALEMAGT
ELPAPIGAEL AIVFSQINFG VSMSDAFAGL TDRVPVDDLR YLVIAILIQR ESGGNLAEIL
DNVGKLIRKR LQLLDKVRVL SAEGRLGGWI LTLLPPVMGL AIYLLNPELM STLWTTDAGI
RLLWFAITMT CLGMLWIRQI VRIHI
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