| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0543 |
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| Symbol | |
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| ID | 8018169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 574679 |
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| End bp | 575620 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644829322 |
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| Product | type II secretion system protein |
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| Protein accession | YP_002980520 |
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| Protein GI | 241662160 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2064] Flp pilus assembly protein TadC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0603407 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATCG CGCACACCCT ATTGCTGGCC GGAACGTTCA TCGTCGTGTT TGGCGCCGTG
CTCATCGCGC TGTTTGTTGT GCGCCCGACC ATCCTGCAAC AGCGCTTGGG GCAGATCGAC
CGCGAGTCGC CCGGCCTCGC TCCCAAGCAA GCGCCTTCCG ACTGGCTGCG CAAGTTGGGG
CGCCTCGCCA GGCCACTCGC ACGCGCGTCG TTGCCCAAGG AGGGCTGGGA AGACTCAGCG
CTGAAGGCCC GCTTCGTACA TGCCGGCTGG CGCTCGCCAG AGGCGGTGCC GATCTACTTT
GGCATCAAGA CAGCGCTGGC CGGTGGCATC CCCCTTGTGC TGTCCCTACT GCTGGTGCGC
CGGTTCGATT CCGATCATGA AACGGCCTAC CTCGCCGCCC TGCTTGCAGG CGCGCTTTTC
GGCTTCTACC TGCCCAACGT CGTGCTGGCC ATGAAGATCA AGCGCCGCAA GCGCGACATC
TTCGAAGCCT TTCCAGACAG CCTCGACCTC ATCATGGTGT GCGTTGAAGC GGGTCTGGGC
CTGGACTCCG CCGTGCTGCG CGTGGTGGAA GACATGCGTG ATGCCCGTCC TGCCATGGCG
CACGAGTATG AGCTCCTGAC GCTGGAACTG CGGGCGGGCC TGGCCCGCGA GAAAGCACTG
CGCAACTTTG CGGCACGCAC CGGGGTGGAA GACGTCAGCA TGCTGGTCGC GATGCTGATC
CAGGCCGACC GCTTTGGAAC CAGCGTTGCA GAATCGCTTC GCGTGCACTC CGACATGCTG
CGCACCAAGC GCCAGATGCT GGCCGAGGAA CGAGCCGCCA AGATCGGCAC CAAGGTCCTG
TTCCCATTGA TCTTCTGCCT GTTCCCCGCG CTCTACGTGG TGCTGCTCGG GCCGGCAGGC
ATCCAGATCA TGGCGGGCCT GCGCTCGGTC ATCAACAACT AG
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| Protein sequence | MQIAHTLLLA GTFIVVFGAV LIALFVVRPT ILQQRLGQID RESPGLAPKQ APSDWLRKLG
RLARPLARAS LPKEGWEDSA LKARFVHAGW RSPEAVPIYF GIKTALAGGI PLVLSLLLVR
RFDSDHETAY LAALLAGALF GFYLPNVVLA MKIKRRKRDI FEAFPDSLDL IMVCVEAGLG
LDSAVLRVVE DMRDARPAMA HEYELLTLEL RAGLAREKAL RNFAARTGVE DVSMLVAMLI
QADRFGTSVA ESLRVHSDML RTKRQMLAEE RAAKIGTKVL FPLIFCLFPA LYVVLLGPAG
IQIMAGLRSV INN
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