Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0540 |
Symbol | |
ID | 8018166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 571787 |
End bp | 573103 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644829319 |
Product | hypothetical protein |
Protein accession | YP_002980517 |
Protein GI | 241662157 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0800499 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCAGG GGAAGATCAT GCGCCACCAG CACCCGAGCC AAGCCATCAA GCCGCAGCGC CATTGGATCA ACGCGGATAC CGTACGCATG GGCAGCACGG CGATGCTGCT GCTCATCCTT GCCCTTTTTT CAATCGGCGC CTGGGTGAGC GATGGGTTTA CGGACCGGCG CATCACTGGC GTGGGGTCGG ATTTCTCCGT GTTCTGGGGG GCTTCATACA TTGCCCTGCA CGATGGCACG CTGCAGGCGT ACGACCTGAA TCGCATGATG GCGGTTATCC ATCAGTTCGG CACGCTGGCC TCGGGCAGCG ACAGGCTTCT GCCATGGCTG TATCCGCCGA CCTTCCTGCT GGTGGTGCTG CCGCTGGCAC TGCTGCCTTT CTGGCCAAGC TATCTGGTGT TCATGCTGGC CACCGGTCTC TTCTATGTGA AAGCGACGCT CGGCCTCCTG GGCAATCGCG TAATGCCGCA TCACCGCGCC TGGGTGACGG TAGTCGGCTC GCCCGCAGTG TTCGTGACGG TGTTGATGGG CCAGAACTCC ATGCTGACTG CAGGGTTGGC AGCCATGGCG GTCACGTGGC AAGACAAACG ACCGGTGCTG GCCGGTGTGG CCATCGGCCT GCTGGCGATC AAGCCCCAGT TGGCGATGCT CTTCCCGATC GTGCTGCTCG CATCACGTGC GTGGAGAACA CTGGCAAGCG CAGCCGCCAC GGTGCTGGGA TTTGCTGGCG TCAGCATTGC CGTGTGCGGC TGGAAGACAG TGCCGGCCTT TCTTGAGAGC GTGCGCTGGG CGCAAGAAAA CATGATCGAT GATGGCGGCG CGTCGTGGTA CGTGATGCCC ACCTTCCTCG CCGCCGCGCG CGCGGCCGGC CTGGGTGTCT CGGTGGCACA CGCGATTCAG ATGACAGCAG CCATCATCGC CGTTGGTGCA CTGGTGTACG TCTGGCGCCG CATCTCCGAT AACGGCCTGC GCATCGCCAT GTTGGCGACC GCCACGATGC TGACCTCACC GTACCTGCGC GCGTACGAGC TCACCTGGTT GCTCGTCGCG GTCGCGGGCG TCGTCAGCCA CGGCACACGA TTTGGGTTGT CCGGCAGGGA ACGGTTCGTA CTGGTGCTGG CGTGGCTGCT GCCGCTGTTC GAGTTCGTCA ATCCTCTGTG CAAGCTGCCG CAGATTGGCC CGCTTGTGTT CGTTGCCATG GCGGTGCTGG TCGTGCGGCG GGCAACCATG TACGCCGAGC ACGGCGCGGC GCTCGCCTCC CCACTGCAAA CAAACCTGCG GGCACGCGCA ACGCAGCCAG CAAAACCCAA CCGATAG
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Protein sequence | MHQGKIMRHQ HPSQAIKPQR HWINADTVRM GSTAMLLLIL ALFSIGAWVS DGFTDRRITG VGSDFSVFWG ASYIALHDGT LQAYDLNRMM AVIHQFGTLA SGSDRLLPWL YPPTFLLVVL PLALLPFWPS YLVFMLATGL FYVKATLGLL GNRVMPHHRA WVTVVGSPAV FVTVLMGQNS MLTAGLAAMA VTWQDKRPVL AGVAIGLLAI KPQLAMLFPI VLLASRAWRT LASAAATVLG FAGVSIAVCG WKTVPAFLES VRWAQENMID DGGASWYVMP TFLAAARAAG LGVSVAHAIQ MTAAIIAVGA LVYVWRRISD NGLRIAMLAT ATMLTSPYLR AYELTWLLVA VAGVVSHGTR FGLSGRERFV LVLAWLLPLF EFVNPLCKLP QIGPLVFVAM AVLVVRRATM YAEHGAALAS PLQTNLRARA TQPAKPNR
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