Gene Rpic12D_0540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0540 
Symbol 
ID8018166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp571787 
End bp573103 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content64% 
IMG OID644829319 
Producthypothetical protein 
Protein accessionYP_002980517 
Protein GI241662157 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0800499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCAGG GGAAGATCAT GCGCCACCAG CACCCGAGCC AAGCCATCAA GCCGCAGCGC 
CATTGGATCA ACGCGGATAC CGTACGCATG GGCAGCACGG CGATGCTGCT GCTCATCCTT
GCCCTTTTTT CAATCGGCGC CTGGGTGAGC GATGGGTTTA CGGACCGGCG CATCACTGGC
GTGGGGTCGG ATTTCTCCGT GTTCTGGGGG GCTTCATACA TTGCCCTGCA CGATGGCACG
CTGCAGGCGT ACGACCTGAA TCGCATGATG GCGGTTATCC ATCAGTTCGG CACGCTGGCC
TCGGGCAGCG ACAGGCTTCT GCCATGGCTG TATCCGCCGA CCTTCCTGCT GGTGGTGCTG
CCGCTGGCAC TGCTGCCTTT CTGGCCAAGC TATCTGGTGT TCATGCTGGC CACCGGTCTC
TTCTATGTGA AAGCGACGCT CGGCCTCCTG GGCAATCGCG TAATGCCGCA TCACCGCGCC
TGGGTGACGG TAGTCGGCTC GCCCGCAGTG TTCGTGACGG TGTTGATGGG CCAGAACTCC
ATGCTGACTG CAGGGTTGGC AGCCATGGCG GTCACGTGGC AAGACAAACG ACCGGTGCTG
GCCGGTGTGG CCATCGGCCT GCTGGCGATC AAGCCCCAGT TGGCGATGCT CTTCCCGATC
GTGCTGCTCG CATCACGTGC GTGGAGAACA CTGGCAAGCG CAGCCGCCAC GGTGCTGGGA
TTTGCTGGCG TCAGCATTGC CGTGTGCGGC TGGAAGACAG TGCCGGCCTT TCTTGAGAGC
GTGCGCTGGG CGCAAGAAAA CATGATCGAT GATGGCGGCG CGTCGTGGTA CGTGATGCCC
ACCTTCCTCG CCGCCGCGCG CGCGGCCGGC CTGGGTGTCT CGGTGGCACA CGCGATTCAG
ATGACAGCAG CCATCATCGC CGTTGGTGCA CTGGTGTACG TCTGGCGCCG CATCTCCGAT
AACGGCCTGC GCATCGCCAT GTTGGCGACC GCCACGATGC TGACCTCACC GTACCTGCGC
GCGTACGAGC TCACCTGGTT GCTCGTCGCG GTCGCGGGCG TCGTCAGCCA CGGCACACGA
TTTGGGTTGT CCGGCAGGGA ACGGTTCGTA CTGGTGCTGG CGTGGCTGCT GCCGCTGTTC
GAGTTCGTCA ATCCTCTGTG CAAGCTGCCG CAGATTGGCC CGCTTGTGTT CGTTGCCATG
GCGGTGCTGG TCGTGCGGCG GGCAACCATG TACGCCGAGC ACGGCGCGGC GCTCGCCTCC
CCACTGCAAA CAAACCTGCG GGCACGCGCA ACGCAGCCAG CAAAACCCAA CCGATAG
 
Protein sequence
MHQGKIMRHQ HPSQAIKPQR HWINADTVRM GSTAMLLLIL ALFSIGAWVS DGFTDRRITG 
VGSDFSVFWG ASYIALHDGT LQAYDLNRMM AVIHQFGTLA SGSDRLLPWL YPPTFLLVVL
PLALLPFWPS YLVFMLATGL FYVKATLGLL GNRVMPHHRA WVTVVGSPAV FVTVLMGQNS
MLTAGLAAMA VTWQDKRPVL AGVAIGLLAI KPQLAMLFPI VLLASRAWRT LASAAATVLG
FAGVSIAVCG WKTVPAFLES VRWAQENMID DGGASWYVMP TFLAAARAAG LGVSVAHAIQ
MTAAIIAVGA LVYVWRRISD NGLRIAMLAT ATMLTSPYLR AYELTWLLVA VAGVVSHGTR
FGLSGRERFV LVLAWLLPLF EFVNPLCKLP QIGPLVFVAM AVLVVRRATM YAEHGAALAS
PLQTNLRARA TQPAKPNR