| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0533 |
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| Symbol | |
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| ID | 8018159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 564165 |
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| End bp | 565607 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644829312 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_002980510 |
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| Protein GI | 241662150 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTAATTA TAGGGACGGG GTATGACGAT TTCAAGAACG GGCGTAGTGG ATGTCGAGAT
TCACTCAACC GCGAAACGGC CATCGAGCAC GCACACGACA CCTCGAAGAA TGTCGCAGCC
GTTCTGGCCA GCCACATTTC GCGCACCGTT GAATCGGCAG ACCAGTCATT GCAGACGCTG
ATAGGCGCGC TCGACAAACC CGGCATCCGC AACCTCGATC CGCAGGTTCG GCACGATCTG
CTGTTCAGCC CGACGGCATC GGCCCGGTAT GTCACCGGCA TGGGCGTGAC CGACGACAAG
GGCCAGCTCG TTGACGGATG CTGCTCCTTG ACCCACCGCT GGGATTTCAG TGACCGCGAC
TACTTCATCG TTCATCGCGA TCACGCAAAC GTTGGCCTCT ATGTGTCCGG CGTCTACAAG
GCCCGGTCAC GCGCAGGCGT GGAGGCCATC GCGCTGAGCC GAAGGATGGA CCGGCGGGAT
GGGACGTTTG CGGGCACCGC ACTGGTGGCA ATCGACCTCG ATTACTTCAA GCAGCTTCTT
GAAAAGCTCG ATGTGGGGCC ACGCGGCGTT ACGGCCATCG TGCGCACCGA CGGCACGCTG
CTGGCGAGAA ATCCACCGCC CAGCGCGGCT CGGGCACCCG ATCTCAACAA ATCGTTGACG
TTCCCGCGCA TGGTGAATCA GGAGTCGGGC TTTTACGTGG CCCCGTCGTC CAGCGACGGT
GTGCTGCGCC TCTATACGTT TCAACGCGTG CCGGGCACAC CGTTCATCGC GGTCGTTGCC
CCCGCCATGA GCGACGCGCT TGCACCGTGG CAGCGGCTGT CGTGGATCGT CGGGTTGTCG
TCGCTGTCGG TCAGCCTCGC CTTCTGCGCA GGCGTATGGC TCCTGGCGTT TGCGCTGCGA
GGGCGCGTGA TGGCGGAAAA CCACCTGCGT GAGCTGACAC AAACCGACCC GCTCACCGGG
CTGAAGAACA GGCGCGCCCT GGATGTTGCG CTGGAGAACG AGTGGGATCG GCTGCAACGG
AATGACAGTC GGCTGTCCGT GCTCTTTATC GATGCCGATC ACTTCAAACG CTATAACGAC
GCGCACGGCC ATGCTCAGGG CGACGTCGCG CTTCAGTACC TCGCCCAGTG CATTTCCAAG
CATGCGCGAC GACGCGGCGA CCTGGCGGCC CGATACGGCG GAGAGGAATT CGTGGTGTTG
TTGCCCGATA CGGGCGAAGC GGGTGCCACG CGGATCGCCG AAGCGATCCG TGCCGAAGTG
GAAGGCGCCG GCGCGCCCGT CGGCGACACC GGTTTGGCCC CTTTCACCGT GAGCGTCGGT
TGCGCGACCG CGCGGCGCGC GAGCTTCCCG TCGCTGAACG CATTGACCAA GGCTGCGGAC
GATGCGCTCT ACGAAGCCAA GCGTAAAGGG CGCAACCGCG TTGACTACGC CACGGTTGGC
TAG
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| Protein sequence | MLIIGTGYDD FKNGRSGCRD SLNRETAIEH AHDTSKNVAA VLASHISRTV ESADQSLQTL
IGALDKPGIR NLDPQVRHDL LFSPTASARY VTGMGVTDDK GQLVDGCCSL THRWDFSDRD
YFIVHRDHAN VGLYVSGVYK ARSRAGVEAI ALSRRMDRRD GTFAGTALVA IDLDYFKQLL
EKLDVGPRGV TAIVRTDGTL LARNPPPSAA RAPDLNKSLT FPRMVNQESG FYVAPSSSDG
VLRLYTFQRV PGTPFIAVVA PAMSDALAPW QRLSWIVGLS SLSVSLAFCA GVWLLAFALR
GRVMAENHLR ELTQTDPLTG LKNRRALDVA LENEWDRLQR NDSRLSVLFI DADHFKRYND
AHGHAQGDVA LQYLAQCISK HARRRGDLAA RYGGEEFVVL LPDTGEAGAT RIAEAIRAEV
EGAGAPVGDT GLAPFTVSVG CATARRASFP SLNALTKAAD DALYEAKRKG RNRVDYATVG
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