| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0525 |
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| Symbol | |
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| ID | 8018151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 553604 |
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| End bp | 555361 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644829305 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_002980503 |
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| Protein GI | 241662143 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCGGC GCTTTGGCGC CAGCGTCGCC ATCGTCCTCG TTCCGGTGTT GTCGTTGTCG
TGCTGGCTGC TGGGCTATGC ATGGCTGGCC TACGGCCGCG CCGACGACGC CGCTCGTAGT
GTGCAGGCGC TACGCATGGC ACTGCTGGCC ATGGAGAAAG TTTCCGCTGA GCGCGGCCCG
ACCAACGGCG TGCTTGGCGA GGACCTGCCG GTGCCCGCAG AGCGCAGTGC GGCCCTGCAA
CGCATGCGCG CCGTCAGCGA TGAACACATC GCCAAGCTGC TTGACGCGCT CGGACCTGAA
CATTGCCCCG GCTGCAAAGC CGACATCAAC ACCGCCCGCC GCGCTCAGAC GTACCTGACC
GCTGCACGCG CCAACATCGA CCGGCTGACG GCCCTGCCGC TGCATGCGCG CAGCAGCGAC
GATTTGGCCG ACGGCGTGAA TCGCATGATT GCGGTCATCC CCGAATTTCT GCCCATCGTC
AACGCGCGCA CGGCCAACAT CACGCGCGGC GATCCCGACG TGCTCAATTG CCTGACGCTC
GCACGGCTGG CGGCGGATCT GCGGGAGTAT GCGGGCCAGC TCGGTTCGCG CTTTACCGGC
GCGCTGGCCA TGCACCGCGC GCTCACGCTT GAAGAGCAGC TCGCCATTGA GCGCACCCAG
GGCCGCATCG ACCAACTGCG CAGCATGATC GAGACCCGCG TGGCCACGCC GTCCACCTTG
AACCAGCATG CGGTCGCGAC GCTCGGGGCA CAGTACTTCG GCGATGGGCT GCGCTATGTG
GCCGCCGCGC GCGCCAAGGC CAGCCAGCCG GGCGGCGTTG ATATCACGCC CGCCGCATTC
GCTGAGCGCT ACGTGCCCAC GATGCGCGCC ATCACGGATT TCCGCGACAT CGTGCTGGGT
CTGGCGGATG ACGACATCCG CCAACATCGA CGCGAAATGC TGTTGGTGCT CGTCGGCTCG
GCCGGTGCGG TGTTGTCGCT GCTGGGCGCG CTGGCATGGA TGACGCTTTC GTTCCGCCGC
AACGTGGTGG GCCCGTTCGT CAACGCTACG CGGCTCATCG ACGGGATCGC GCGCGGCAAT
CTGAGCGTGC ACATCCCGAC CAGCTTTGCG CGGCGAGAAA TCCGCGCGAT GTTTGAAGCG
ATCCGCGTGC TGCGCATCAA CAGCATCGAG CGCCGCCGGC TGGAGGTGGA ACGCGCGCAC
CTGATGCAGG AACTCGCGCG CATGGCCGAG ACCGATCCGC TCACCCAACT GCTCAACCGC
CGCGCGTTTG AAGACCGCGC CAGCGCGATG TGCAACGCAC CGCATCCGAA GGCGCGGCTC
GTTGCACTGA TCATGTTCGA CATCGACCAC TTCAAGCGCA TCAACGATAC CTACGGCCAT
GCCGTGGGCG ATGAAGCGCT GCGCACCGTT GCCGGCCTGT GCCGCGCCGA GGGCCCGTCC
GCCGACATGG TGGCGCGCAT CGGCGGCGAG GAATTTGCGG TGATGATCTG GGCAGATAGC
CTCGCACAGG CGCGCGCAGT GGCCGACCAC CTGCGTCATC GCATTGCCGA GGTGACCGTG
CCCACCGGCA CCGATCTGCC CTGCCGCATG ACGGCCAGCT TTGGCGTGGC GGTAGCGCCC
GCCGCCGATG GCCCGAAGCT CGAATCGCTG CTGCGGCGGG CAGACCGTCT GCTCTATGCC
GCCAAGCTGG CGGGACGCAA CTGCGTGATG ACAGATCGCC CGCCCGGATC ATCAGACCTG
TCGGTCGCGG CCGATTGA
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| Protein sequence | MDRRFGASVA IVLVPVLSLS CWLLGYAWLA YGRADDAARS VQALRMALLA MEKVSAERGP
TNGVLGEDLP VPAERSAALQ RMRAVSDEHI AKLLDALGPE HCPGCKADIN TARRAQTYLT
AARANIDRLT ALPLHARSSD DLADGVNRMI AVIPEFLPIV NARTANITRG DPDVLNCLTL
ARLAADLREY AGQLGSRFTG ALAMHRALTL EEQLAIERTQ GRIDQLRSMI ETRVATPSTL
NQHAVATLGA QYFGDGLRYV AAARAKASQP GGVDITPAAF AERYVPTMRA ITDFRDIVLG
LADDDIRQHR REMLLVLVGS AGAVLSLLGA LAWMTLSFRR NVVGPFVNAT RLIDGIARGN
LSVHIPTSFA RREIRAMFEA IRVLRINSIE RRRLEVERAH LMQELARMAE TDPLTQLLNR
RAFEDRASAM CNAPHPKARL VALIMFDIDH FKRINDTYGH AVGDEALRTV AGLCRAEGPS
ADMVARIGGE EFAVMIWADS LAQARAVADH LRHRIAEVTV PTGTDLPCRM TASFGVAVAP
AADGPKLESL LRRADRLLYA AKLAGRNCVM TDRPPGSSDL SVAAD
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