| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0519 |
|---|
| Symbol | |
|---|
| ID | 8018145 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 547157 |
|---|
| End bp | 547936 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644829299 |
|---|
| Product | Paraquat-inducible protein A |
|---|
| Protein accession | YP_002980497 |
|---|
| Protein GI | 241662137 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2995] Uncharacterized paraquat-inducible protein A |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCTGC TCACCGTGAA ACTCCCCATC CCGCTGCCCC AGTCATGGCG CCCAGCGGGC
GACACCACCG ATGCCAAGGC CGCCCCGGTC GCCCTGCCGC TGCCGGGCGA TCCCGATGCC
TGGATCGCCT GCGAGCATTG CGACACCCTG CATCGCCACG AAGTCATTGC GCTGGATGAA
GAGGCGCATT GCACACGCTG CGGCATCAAG CTGTATCGCA ATCAAAGCGA GCGGCTGTCG
GTGCTGCTGC CCCTGGTGGT GACGGGCCTC ATCGTCTACA TCGTCGCCAA CATCTTTCCG
ATTGCCGAGA TGAACGGCGG CGGCAACCGG CACGCCACCA CGCTGTGGGG CGCCATCGTG
GCCCTGTATG ACTACGACAT GCTCTTCGCT GCCGTGCTGG TGGCGCTCAC CACGGTGTTC
TTCCCGCTGA TGTACATGTC GGTGCTGGCG CCGCTGCTTA TCGCGAGATG GCGCGGGCGG
CAGCATCCGG CGGCCGCGCT CGTGCTGCGC GCGGCTGCGT TGATTCGCCC CTGGGCGATG
GTCGAGATCT TCATGCTGGG CGTGGTGGTG GCGCTCATCA AAGTGGCGCG CATGGTGTCG
CTCGAGGCCG ATGCGGGCTT GTGGGCGTTT GCCGCGCTCA CTGTGTTCCT GACGGTGGCG
TTGTCGATCG ACCTGCGACC GTTCTGGCGC GAAATCGGGT TGACGCTGCA GCCAGGCTCG
CACGTCGACG CGCCGACCGG CATGGACGCC GCGGCCCGCC CCGGCGAGGA TCGCCCATGA
|
|---|
| Protein sequence | MELLTVKLPI PLPQSWRPAG DTTDAKAAPV ALPLPGDPDA WIACEHCDTL HRHEVIALDE
EAHCTRCGIK LYRNQSERLS VLLPLVVTGL IVYIVANIFP IAEMNGGGNR HATTLWGAIV
ALYDYDMLFA AVLVALTTVF FPLMYMSVLA PLLIARWRGR QHPAAALVLR AAALIRPWAM
VEIFMLGVVV ALIKVARMVS LEADAGLWAF AALTVFLTVA LSIDLRPFWR EIGLTLQPGS
HVDAPTGMDA AARPGEDRP
|
|---|
| |