| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0517 |
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| Symbol | |
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| ID | 8018143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 544783 |
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| End bp | 546426 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644829297 |
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| Product | Mammalian cell entry related domain protein |
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| Protein accession | YP_002980495 |
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| Protein GI | 241662135 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3008] Paraquat-inducible protein B |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACC CCGTCGATAA CGAAAACATT CCCGCGCCGC GCCGCATGAA GCGCAAGCGT
TGGCTGCCCT CTCTGATCTG GCTGGTGCCG ATCGTGGCGC TTACGGTGGG CGCCACGCTC
ATGGCGCGCG TGATCCTCGC GCGCGGCGCG CAAGTGACTG TCACGTTCAG CTCGGCCGAG
GGCATTGAGG CAGGCAAGAC GCGCGTGAAA TACAAGAGCG TCGATATCGG CGTGGTCAAG
GCTGTGGGGC TCACCGACGA CCGGTCCGGC GCCGTGGTGC TGATCGAACT CACGCATGAC
GGCAAGGCGT TTGCCGCGTC CGACACTCGG TTCTGGGTGG TGCGTCCGCG CGTGGCGGCC
GGCAGCATCT CGGGGCTCGG CACGCTGCTC TCCGGGGCCT ACATCGGCGT GGACGGCGGC
CGCTCGCAAG AGAAGAAATC CGTCTTCAAG GGCCTCGACA CACCGCCAGC CATCTCCGCG
GATGCCCCGG GCAAACAGTT CACGCTGCAT GCGCCCGACC TGGGCTCGCT CGATATCGGC
GCCCCGGTGT ATTTCCGCCG CGTGCGCGTG GGGCAAGTCA CTGCCTACGA CATCGACGCC
GACGGCAAGG GCGTGACCTT GCACATCTTC GTCAACGCGC CGTTCGACAA GTTTGTGGCA
CGCGGCACGC GGTTCTGGAA CGCCAGCGGC ATCGACCTCA AGCTCGACGC CAACGGGCTG
AAGGTCGATA CGCAATCGCT CCTGACCGTG GCGCTCGGCG GCATCGCGTT CCAGACACCC
GAAGAAGCCG ATCACGAGCC GGCTGCCTCC GACGCGCAGT TCCAGCTCGT GCGCAACGAA
ACCGCGGCGC TGAAGGACCC TGAACACCTG TCGCAGACCG TGGTGATGTA CTTCCACCGC
TCGCTGCGCG GGCTCAACGT GGGCGCGCCG GTGGAATTCA AGGGCATCAA CGTGGGCGAG
ATCAAGTCGA TCGGCATCCA CTACAGCAAG AAGCGCCACG AGTTCGTGCT GCCGGTCACG
GCCACGCTGT ACCCCACCCG CTTCGGCATG GACATCCGCG ACGACAACCC TCAGCACGCC
GCCGAAGACG TCCGCACGCA GTTCGACGTG CTGGTGAAGA ACGGCATGCG CGCGCAGCTC
AAGAGCGCGA GCCTGCTGAC GGGACAGCAG TTCGTGAACC TCGACTTCAT CGACACGGCC
GAGCGCGAGA AGACCCCGCC GCGCTTCGGC ATGCGCGATC GCGACGGCGC GTATGTGTTC
CCCACGGCCG ACAACCCCAC GGACGATATC GAAGCGCAGA TTGCCGGCAT CGCCAAGAAG
CTCAACAAGG TGCCGTTCGA GCAGATCGGA CAGGATGTTC ACCGCACGCT GACGACGCTC
GACGCTACGC TCAAGCAGAC CGAGCAACTG GCCAAGACCG TCAACAGCGA TCTCGCCCCG
CAGATGAAGG AAACGCTGGC CGAGGCGCGC CGCACGCTCG ACTCTGCGCG GCAGGTCTTC
TCCGACGATG CCCCGCTGCA ACGCAATGCG CGCGACACGC TGGAACAGGT GGCCAAGGCC
GCCGCGTCCG TGCGCGTGCT GACCGACTAT CTGGACCGCC ACCCGGAAGC GCTGATCCGC
GGCAAGGCAA AGGACGCGCA ATGA
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| Protein sequence | MTDPVDNENI PAPRRMKRKR WLPSLIWLVP IVALTVGATL MARVILARGA QVTVTFSSAE
GIEAGKTRVK YKSVDIGVVK AVGLTDDRSG AVVLIELTHD GKAFAASDTR FWVVRPRVAA
GSISGLGTLL SGAYIGVDGG RSQEKKSVFK GLDTPPAISA DAPGKQFTLH APDLGSLDIG
APVYFRRVRV GQVTAYDIDA DGKGVTLHIF VNAPFDKFVA RGTRFWNASG IDLKLDANGL
KVDTQSLLTV ALGGIAFQTP EEADHEPAAS DAQFQLVRNE TAALKDPEHL SQTVVMYFHR
SLRGLNVGAP VEFKGINVGE IKSIGIHYSK KRHEFVLPVT ATLYPTRFGM DIRDDNPQHA
AEDVRTQFDV LVKNGMRAQL KSASLLTGQQ FVNLDFIDTA EREKTPPRFG MRDRDGAYVF
PTADNPTDDI EAQIAGIAKK LNKVPFEQIG QDVHRTLTTL DATLKQTEQL AKTVNSDLAP
QMKETLAEAR RTLDSARQVF SDDAPLQRNA RDTLEQVAKA AASVRVLTDY LDRHPEALIR
GKAKDAQ
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