| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0515 |
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| Symbol | |
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| ID | 8018141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 542645 |
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| End bp | 544108 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644829295 |
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| Product | transcriptional regulator, GntR family with aminotransferase domain protein |
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| Protein accession | YP_002980493 |
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| Protein GI | 241662133 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.663704 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGTCA CCGAGTTGAC CTCCCCGCCC GCGCAGCCGC TGTACCGGAC GCTTGCCGAC
CATTACCTCG GCGCGATCCG CAGCGGGGTG CTGGCGCCGG GCGAGCGCAT GCCGTCGGTG
CGCATGCTGA TGCGCACGCA CGCCGTGAGT TTGTCGACGG CGCTGCAGGT GTGCCGTCAC
CTGGAGACGG AAGGTTGGTT GGAAGCACGG GAGCGCTCCG GCTACTTTGT GCGTCAGCCG
CGGCGCGCCT TGCTGGCTCC GGTCAAGGAA CCCGAAGTTT CGACGCCCGA TCCGGCGGCT
TACGTGGGCG TGCATGCGCG CGTGTCCGCC ATCGTGGCGC GCGGGCAGCA GGCCACGGTG
CATGTCGACC TGTCGGGAGC GAGTGGGGCT GCCGCGTTGT ACCCGGCGGC GGCACTCAAC
CGGATTGCGT CGCAGGTGCT GCGGCGGTAT CCGCTCCTGT TGACGCAGGC TGTCATCCCG
AACGGCCATC CCGAGTTGCA GACCGCCGTG GCGCGTCGTG CGCTCGACAT GGGCGTGCAG
GTCGCGCCGG ACGACGTGAT CGTCACTCAC GGCTGCATCG AGGCGGTGAA CCTCGCATTG
CGCGCGGTGG CCCAACCGGG CGATACCGTG GCCGTGGAAT CGCCGACTTA TTACGGGTTG
CTGCAGGTGC TGGAAAGCCT GGGCATGCGC GCGGTGGAAA TTCCGACCAG CCCGCGCACC
GGCATGTCGC TGGAAGCGCT GGAGATGGCG GTGCAGGCCT ACGGCAACAT TCGGGCCGTG
GTGGTCGTGC CCAATCTGCA AAACCCGCTT GGCAGCATCA TGCCTGACGC CGCCAAGCGC
CGGATGGCCG CCTTTTGTGA CGCCAACCGC ATCGCCCTGA TTGAAGACGA TACGTATAGC
GCCCTTGGCG ACAGCCCCAC GCCGCTCAAG GCGCTCAAGG CGTGGGACCG CACGGGCAAC
GTCATCTATT GCGCGTCGTT GAGCAAGGTG CTGGCACCCG GCCTGCGCCT GGGCTGGATG
GCCGCCGGCC GCTGGCAGGG GCGCGTGCAG ATGCTGAAGT TTGCGCAGTC GCGGCCGAAC
GATTCGTGGT CGCAGGTGCT GGCGGGGCGC TTCATCGCGT CGGGTGCGTA CGACCGTCAC
CTGCGTACGC TGCGCCAGAC GTTGCGCGAA CAGCGCGAGC GCATGGCTGA ATCGATTGCG
GGATGCTTCC CCGCGGGCAC GCGGTTGTCG GTGCCGTCAG GCGGGTTGGC GATGTGGGTC
GAGCTGCCAG CCAACGTGTC GTCGATGGAA CTGTTCGATG CGGCGCTGGC TCAGGGCATC
CGGATTGCGC CGGGCACGAT GTTCTCGAAC CTGAACCGCT TCGATCATTT CTTCCGCATC
TGCTTCGGGC TGGAACCTTC GGCCAACCTG GAAGCTGCGC TTGCCACGCT CGGCCAGCTC
ACGCAGCAAC TGGCCGAGCG CTGA
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| Protein sequence | MSVTELTSPP AQPLYRTLAD HYLGAIRSGV LAPGERMPSV RMLMRTHAVS LSTALQVCRH
LETEGWLEAR ERSGYFVRQP RRALLAPVKE PEVSTPDPAA YVGVHARVSA IVARGQQATV
HVDLSGASGA AALYPAAALN RIASQVLRRY PLLLTQAVIP NGHPELQTAV ARRALDMGVQ
VAPDDVIVTH GCIEAVNLAL RAVAQPGDTV AVESPTYYGL LQVLESLGMR AVEIPTSPRT
GMSLEALEMA VQAYGNIRAV VVVPNLQNPL GSIMPDAAKR RMAAFCDANR IALIEDDTYS
ALGDSPTPLK ALKAWDRTGN VIYCASLSKV LAPGLRLGWM AAGRWQGRVQ MLKFAQSRPN
DSWSQVLAGR FIASGAYDRH LRTLRQTLRE QRERMAESIA GCFPAGTRLS VPSGGLAMWV
ELPANVSSME LFDAALAQGI RIAPGTMFSN LNRFDHFFRI CFGLEPSANL EAALATLGQL
TQQLAER
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