Gene Rpic12D_0501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0501 
Symbol 
ID8018127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp530768 
End bp532033 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content66% 
IMG OID644829281 
Producthypothetical protein 
Protein accessionYP_002980479 
Protein GI241662119 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.458939 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCG CCATCATCGG GGCGGGCATC GGCGGCTTGA CGCTCGCGTT GATGGCCGAG 
CGGCAGGGTT TTGAAGTCGA AGTGTGGGAG GCCGTGCAGA CGCTGCGGCC GCTGGGCGTT
GGCATCAACC TGCTGCCGCA CGCTGCGCGC CAGTTGTGCG AGCTGGGGCT GGAAGACACG
CTGAGCGCGC TGGCGATACG TACTTCGGCA CTGGCTTACT ACAACCGTTT CGGCCAGCCG
ATCTGGCACG AGCCGCGTGG GTTGGCCGCC GGGTATGACT GGCCGCAGTT CTCCATCCAT
CGCGGCGAAT TCCAGATGGC CCTGGCCGAT GCCGTCATTG AGCGGCTCGG TGCGAATTGC
ATCCGTCTTG GCCACAGCTT CGAAGCGGTT CAATCGACAG GCGAGAAGGG CGGCCCCGTG
CGCTTCACGC TGCGTGATCG CACCAACGAC ACCGTTGTCG AATCCTCAGC CGACGTGCTG
ATCGGTGCAG ATGGCATTCA CTCGGCCGTA CGCCGGCATT TCTACCCGAC GGGCGATGCA
CCGCGCTTTG CGGGCCGCAT GCTGTGGCGC GCCGTCACTG AAGCCGAGCC GTATCTCGAT
GGCCGCACCA TGTTCATGGC GGGCCATCAG GACCAGAAGT TCGTCGCCTA TCCGATCTCC
GAACCGCTGC GCCAGCAGGG CCGCTCGCGC ATCAACTGGA TTGCCGAGCT GCGCGTTCCC
GACGAGGCGC CGCCGCGCAG CGACTGGAAC CGCGAGGTCG ACCGCGCGAT CTTCCGCAGC
GCCTTCGCCG ACTGGAAATG GAACTGGATC GACATTCCCG CCTTGATCGA CGGCGCGCAG
GCCGTGTACG AATTCCCGCT GGTCGACAAG GACCCGCTGC CGCGCTGGAC CTTCGGCCGC
GTCACGCTGC TGGGCGACGC GGCGCACCCG ATGTATCCGA TCGGCTCGAA TGGCAGCGCG
CAGGCGATTC TCGATGCGCG CGCGTTGGTC GATTGCCTGC TCGCCACGCG CGACACCGGC
GTTGCCCTGC GCGAGTACGA GGCCGATCGC CTGCCGCGCA CCGCGGGCAT CGTGCTGCGC
AACCGCCTCA ATGGCCCGGA GCAGGTCATG CAACTCGCGC ATGAACGCGC ACCCCAAGGC
TTTGCGAGCA TCCATGACGT GATCCCGCGC GCCGAGCTGG AAGGGATTGC GATGCGCTAT
AAAAAGCTGG CCGGCTTCGA TCCGCAATCG CTGCGCGATC AGCCGCCCAT GCCCCGCCGC
GCCTGA
 
Protein sequence
MKIAIIGAGI GGLTLALMAE RQGFEVEVWE AVQTLRPLGV GINLLPHAAR QLCELGLEDT 
LSALAIRTSA LAYYNRFGQP IWHEPRGLAA GYDWPQFSIH RGEFQMALAD AVIERLGANC
IRLGHSFEAV QSTGEKGGPV RFTLRDRTND TVVESSADVL IGADGIHSAV RRHFYPTGDA
PRFAGRMLWR AVTEAEPYLD GRTMFMAGHQ DQKFVAYPIS EPLRQQGRSR INWIAELRVP
DEAPPRSDWN REVDRAIFRS AFADWKWNWI DIPALIDGAQ AVYEFPLVDK DPLPRWTFGR
VTLLGDAAHP MYPIGSNGSA QAILDARALV DCLLATRDTG VALREYEADR LPRTAGIVLR
NRLNGPEQVM QLAHERAPQG FASIHDVIPR AELEGIAMRY KKLAGFDPQS LRDQPPMPRR
A