| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0498 |
|---|
| Symbol | |
|---|
| ID | 8018124 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 527756 |
|---|
| End bp | 529117 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644829278 |
|---|
| Product | amidase |
|---|
| Protein accession | YP_002980476 |
|---|
| Protein GI | 241662116 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.798061 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGACGC CCCGCCCGAA CATGATCCGC GCGCTGGCCG CTGCCCTGGC CGCCGGCCGC
ACCACCAGCG TCGCGCTGAC CGAAGCCGCG CTGGAGCGCG CCGAATCGCA TCGCGCCGCA
GGCGGTACCG CCTATGTGAG CATCGACGTG CAGGCCGCGC TGGCGATGGC GCGCGCCGCC
GATGCCGCGC GTGCGGCGGG CAACGTGCCC TCGCTGCTGG CCGGGCTGCC GGTGTCGATC
AAGGATCTGT TTGACGTGGC CGGCCAGGTG ACGGCTGCGG GTTCGCGCGC CCTGGCCGAC
CAGCCGCGCG CCACTGCCGA TGCCGCCGCC GTGGCACGCC TGCGCGCAGC CGGCGCCGTG
CTGCTGGGCC GCACCAACAT GAGCGAATTC GCGTTCTCCG GACTGGGGCT GAACCCGCAC
TACGGCACGC CGCGCACGCC AGCGGACGGC GCACGCGCAG CGGGCGGGTC CACGTCGGGC
GGCGCCGTCA CCGTTGCGGG CGGCATGGCC GTGGCGGCGC TGGGTACCGA CACCGGCGGC
TCGATCCGCA TTCCCTCTGC GTTCTGCAAT CTGACCGGCT TCAAGCCCAC CGCACGCCGC
GTACCGATGA CGGGCGGCGT GCCGCTGTCC ACGTCGCTCG ATTCCGGCGG CCCGCTCGCC
AACTCGGTCG ACTGCTGCGC AATCGTCGAC GCCGTGCTGA GCGGCGAGTC AGGCAACGAC
GCGTTCGACA CCGCCGCCGT GCCGTTGGCC GGACTGCGCT TCGGCGTCAC GCAGGACTAT
GTCGGCGCGG ATCTCGACAA CACGGTCGCC GTTGCATTCG AACGCGCTGT TGAACGGCTG
GAACGTGCCG GCGCGCACAT CGTGCGTTTT GAATTTCCCG AGCTGCTGCA ACTGCCCGAG
ATCAACAGCG GCGGCGGCTT CTCGGCAGCG GAATCCTGGG CATGGCATCG TTCGCTGCTC
GCGCGCGCGG AAGCCCAGTA CGACCCGCGC GTCGCCACGC GCATCCGCCG TGGTGAACAG
ATGAGCGCGG CCGCATACAT CGATGTGATC AACGCACGCG CACGCATGAT CGCCGCCGCT
CGCAAGCGCC TGGGCCACTT CGATGCATGG CTGATGCCGA CGGTTGCCAT CGTGCCGCCC
GAGGTCGCCC CGCTTGAAGC GGACGATGCA GCCTTCTTCC GCGTCAACGC CCTCGCGCTG
CGCAATCCGA GCGTGATCAA TTTCCTGGAC GGCTGCGCGC TGACGCTGCC GGTACACGCG
GCCGGTGAAC TGCCGGTCGG TCTGTCGCTC TGCGGTCTCG CCAACGACGA CGCGCGCATC
CTGCGCGTCG GCCGGGCGGT GGAGGCAGCC CTGCGGCGTT GA
|
|---|
| Protein sequence | MMTPRPNMIR ALAAALAAGR TTSVALTEAA LERAESHRAA GGTAYVSIDV QAALAMARAA
DAARAAGNVP SLLAGLPVSI KDLFDVAGQV TAAGSRALAD QPRATADAAA VARLRAAGAV
LLGRTNMSEF AFSGLGLNPH YGTPRTPADG ARAAGGSTSG GAVTVAGGMA VAALGTDTGG
SIRIPSAFCN LTGFKPTARR VPMTGGVPLS TSLDSGGPLA NSVDCCAIVD AVLSGESGND
AFDTAAVPLA GLRFGVTQDY VGADLDNTVA VAFERAVERL ERAGAHIVRF EFPELLQLPE
INSGGGFSAA ESWAWHRSLL ARAEAQYDPR VATRIRRGEQ MSAAAYIDVI NARARMIAAA
RKRLGHFDAW LMPTVAIVPP EVAPLEADDA AFFRVNALAL RNPSVINFLD GCALTLPVHA
AGELPVGLSL CGLANDDARI LRVGRAVEAA LRR
|
|---|
| |