Gene Rpic12D_0482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0482 
Symbol 
ID8018108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp506649 
End bp507158 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content68% 
IMG OID644829262 
Productphosphoribosylaminoimidazole carboxylase, catalytic subunit 
Protein accessionYP_002980460 
Protein GI241662100 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 
TIGRFAM ID[TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.895023 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAC AGCAATCCGC TCCGCTCGTT GGCGTGGTGA TGGGCTCCAG CTCCGACTGG 
GAGGTGATGC GCCACGCCGT CGACATGCTC ACGCAGTTCG GGATTCCGTT CGAGGCGCAG
GTCGTCTCGG CGCACCGCAT GCCGGACGAC ATGTTTCGCT ACGCTGAAGC CGCACGCGGC
CGCGGTTTGC GCGCCATCAT CGCTGGCGCG GGCGGGGCGG CGCACCTGCC AGGCATGATC
GCCGCGAAGA CGATCGTGCC GGTGTTCGGC GTGCCGGTGC CGTCCAAGTA CCTGCGCGGC
GAAGACTCGC TGCTCTCCAT CGTGCAGATG CCCAAGGGCA TTCCGGTGTC GACGTTCGCC
ATTGGCGAAG CCGGTGCCGC CAACGCAGCG CTGGCCGCCA TCGCCACCAT CGCCACCACC
GATTCGGCGC TCGCCGACAA GCTCGAAGCC TTCCGCGCCC AGCAGACCGA AGTCGCACGC
GGCATGACGC TCCCTGTGCA CGGCGCCTAA
 
Protein sequence
MTAQQSAPLV GVVMGSSSDW EVMRHAVDML TQFGIPFEAQ VVSAHRMPDD MFRYAEAARG 
RGLRAIIAGA GGAAHLPGMI AAKTIVPVFG VPVPSKYLRG EDSLLSIVQM PKGIPVSTFA
IGEAGAANAA LAAIATIATT DSALADKLEA FRAQQTEVAR GMTLPVHGA