Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0482 |
Symbol | |
ID | 8018108 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 506649 |
End bp | 507158 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644829262 |
Product | phosphoribosylaminoimidazole carboxylase, catalytic subunit |
Protein accession | YP_002980460 |
Protein GI | 241662100 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase |
TIGRFAM ID | [TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.895023 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCAC AGCAATCCGC TCCGCTCGTT GGCGTGGTGA TGGGCTCCAG CTCCGACTGG GAGGTGATGC GCCACGCCGT CGACATGCTC ACGCAGTTCG GGATTCCGTT CGAGGCGCAG GTCGTCTCGG CGCACCGCAT GCCGGACGAC ATGTTTCGCT ACGCTGAAGC CGCACGCGGC CGCGGTTTGC GCGCCATCAT CGCTGGCGCG GGCGGGGCGG CGCACCTGCC AGGCATGATC GCCGCGAAGA CGATCGTGCC GGTGTTCGGC GTGCCGGTGC CGTCCAAGTA CCTGCGCGGC GAAGACTCGC TGCTCTCCAT CGTGCAGATG CCCAAGGGCA TTCCGGTGTC GACGTTCGCC ATTGGCGAAG CCGGTGCCGC CAACGCAGCG CTGGCCGCCA TCGCCACCAT CGCCACCACC GATTCGGCGC TCGCCGACAA GCTCGAAGCC TTCCGCGCCC AGCAGACCGA AGTCGCACGC GGCATGACGC TCCCTGTGCA CGGCGCCTAA
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Protein sequence | MTAQQSAPLV GVVMGSSSDW EVMRHAVDML TQFGIPFEAQ VVSAHRMPDD MFRYAEAARG RGLRAIIAGA GGAAHLPGMI AAKTIVPVFG VPVPSKYLRG EDSLLSIVQM PKGIPVSTFA IGEAGAANAA LAAIATIATT DSALADKLEA FRAQQTEVAR GMTLPVHGA
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