Gene Rpic12D_0478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0478 
Symbolpgk 
ID8018104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp501722 
End bp502933 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content65% 
IMG OID644829258 
Productphosphoglycerate kinase 
Protein accessionYP_002980456 
Protein GI241662096 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0126] 3-phosphoglycerate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.716097 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCACG TCCTGCGTCT GTCCGATCTC ATCTCCGAAG GAAAGCTTGC CGGTAAGCGC 
GTGTTCATCC GCGCCGACCT CAACGTGCCG CAAGACGATG CCGGCAACAT CACCGAAGAC
ACGCGCATCC GCGCTTCCGT GCCGGCCATC AAGGCCGCGC TGGACGCCGG TGCCGCCGTC
ATGGTGACCT CCCACCTGGG CCGCCCCACC GAGGGCGAAT TCAAGCCGGA AGACTCGCTC
GCGCCGGTTG CCAAGCGCCT GTCCGAACTG CTGGGCCGTG ACGTGAAACT CGTCCAGAAC
TGGGTTGATG GAGTGGATGT GGCGCCCGGG CAGGTCGTGC TGCTGGAAAA CTGCCGCGTG
AACAAGGGCG AGAAGAAGAA CAGCGACGAA CTGGCCCAGA AGATGGCCAA GCTGTGCGAC
GTCTATGTCA ACGACGCCTT CGGCACCGCC CACCGCGCGG AAGCCACCAC GCACGGCATT
GCCAAATTTG CCCCCGTCGC TTGCGCCGGC CCGCTGCTGG CCGCCGAGCT GGATGCGCTG
GGCAAGGCGC TGGGCCAGCC GGCACGTCCG CTGGTGGCCA TTGTGGCCGG CTCGAAGGTG
TCGACCAAGC TGACCATCCT GAAGTCGCTG GCTGACAAGG TGGACAACCT GATCGTCGGC
GGCGGCATTG CCAACACGTT CATGCTGGCT GCCGGCCTGA AGATCGGCAA ATCGCTGGCG
GAAGCCGACC TCGTGGGCGA TGCCAAGGCC ATCATCGAGA TGCTGGCGGC GCGCGGGGCG
TCGGTGCCCA TCCCCGTCGA CGTGGTGTGC GCCAAGGAAT TCAGCGCCAC CGCGGTCGCT
ACCGTCAAGG ACGTGGCCGA TGTGGCCGAC GACGACATGA TCCTCGACAT CGGCCCGAAG
ACGGCTGCGC AACTGGCCGA ACAACTGAAG AGTGCCGGCA CCATCGTCTG GAACGGTCCG
GTCGGCGTGT TCGAATTCGA CCAGTTCGGC AATGGCACCA AGGTGCTGGC CGAGGCGATT
GCTGCCTCGT CGGGTTTCTC GATTGCGGGC GGCGGCGACA CGCTGGCTGC CATCGCCAAG
TACAACATCG CCGACAAGGT GGGCTATATC TCCACTGGCG GCGGTGCGTT CCTGGAATTC
CTGGAAGGCA AGACGCTGCC GGCCGTCGAA ATCCTGGAAC AACGCGCGCA GAACCAGGCC
GCTGTGGCCT GA
 
Protein sequence
MPHVLRLSDL ISEGKLAGKR VFIRADLNVP QDDAGNITED TRIRASVPAI KAALDAGAAV 
MVTSHLGRPT EGEFKPEDSL APVAKRLSEL LGRDVKLVQN WVDGVDVAPG QVVLLENCRV
NKGEKKNSDE LAQKMAKLCD VYVNDAFGTA HRAEATTHGI AKFAPVACAG PLLAAELDAL
GKALGQPARP LVAIVAGSKV STKLTILKSL ADKVDNLIVG GGIANTFMLA AGLKIGKSLA
EADLVGDAKA IIEMLAARGA SVPIPVDVVC AKEFSATAVA TVKDVADVAD DDMILDIGPK
TAAQLAEQLK SAGTIVWNGP VGVFEFDQFG NGTKVLAEAI AASSGFSIAG GGDTLAAIAK
YNIADKVGYI STGGGAFLEF LEGKTLPAVE ILEQRAQNQA AVA