Gene Rpic12D_0471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0471 
Symbol 
ID8018097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp496412 
End bp497488 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content67% 
IMG OID644829251 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_002980449 
Protein GI241662089 
COG category[R] General function prediction only 
COG ID[COG0429] Predicted hydrolase of the alpha/beta-hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATC CGTCTCGCCA CGCCACCTCC CTTGAACTCA ATCTGAACGC CCTGCTTGCA 
GGGCCGTTCG AGCCACACGC GTTCCGTTCG CCGTGGTGGC TGATCGGCGG CAATGCGCAG
ACGATCGTGC CCGCGCGCCT GTGGCGCTTT CCGCGGATTG CGTATCGGCG CGAACGTTGG
GACACACCCG ACCACGACTT CATCGACCTG GACTGGACCA CGCACGAGAC CGACGCGCAC
GCGCCGCTCG TCGTTATGTT CCACGGTCTG GAGGGTGATT CGCGCAGCCA CTACGCGCGG
CTGCTGATGG ACGCGTTGCG CGGCCGCCGC TGGCTGGGCG TCATTCCGCA CTTTCGCGGG
TGCTCGGGCG AGATGAACCT CGCGCCGCGC ATGTACCACT GCGGCGACGG CGCCGAGATC
GCGTGGATCC TCGAACGCCT GTATCGGACG GTTTGCCATC CGCAGGGCCG CAAGCTCCTT
GTCGTCGGCA TCTCGCTGGG CGGCAACGCG CTGCTGCGCT ACCTGGGCGA ACAGGGCGCC
GATGCCCGCT ACGTGACGGC GGCTGCGACG GTCTCCGCAC CGCTGGACAT GCGGGCCGGC
GGCGCAGCTC TGTCCAAGGG CTTCAACATG GTCTACACGC GCATGTTCCT GCGCACGCTC
AAAGCCAAGG CCAATGCAAA GCTCGATCAA CATCCTGGCC TGTACGACCG CGACGCCATG
ATGGCAACGC GCACGCTGGG GCAGTTCGAC AACCTCGTCA CCGCGCCGCT GCACGGTTTT
CGCGACGTGC TCGATTACTG GACGCGCGCC TCATCCAAGC CCGTGCTTAG GGAAGTGCGT
GTGCCGGCGC TGGTGCTGAA CGCGCGCAAC GATCCGTTCC TGCCCGGACA GCATCTGCCC
GGCGCGGCCG AGGTGGCACC GGACATCACG CTGGACCAGC CGCTGCACGG CGGCCACGTC
GGCTTCCTGC TGCGCCATGG CAAGACGGGC CGCGTCGATT GGATGCCCGC ACGCGTCCTG
CGCTTTTTCG ATGAAGTACT CGGCCGCCAA GCCAACGCGG AGGATGCGCA TGGATGA
 
Protein sequence
MTDPSRHATS LELNLNALLA GPFEPHAFRS PWWLIGGNAQ TIVPARLWRF PRIAYRRERW 
DTPDHDFIDL DWTTHETDAH APLVVMFHGL EGDSRSHYAR LLMDALRGRR WLGVIPHFRG
CSGEMNLAPR MYHCGDGAEI AWILERLYRT VCHPQGRKLL VVGISLGGNA LLRYLGEQGA
DARYVTAAAT VSAPLDMRAG GAALSKGFNM VYTRMFLRTL KAKANAKLDQ HPGLYDRDAM
MATRTLGQFD NLVTAPLHGF RDVLDYWTRA SSKPVLREVR VPALVLNARN DPFLPGQHLP
GAAEVAPDIT LDQPLHGGHV GFLLRHGKTG RVDWMPARVL RFFDEVLGRQ ANAEDAHG