| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0463 |
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| Symbol | |
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| ID | 8018089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 488360 |
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| End bp | 488863 |
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| Gene Length | 504 bp |
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| Protein Length | 167 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644829243 |
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| Product | type 4 fimbrial pilin signal peptide protein |
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| Protein accession | YP_002980441 |
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| Protein GI | 241662081 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4968] Tfp pilus assembly protein PilE |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.961425 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCGA TGCGTCTCAA CAAGCGTGTC CAGAAGGGTT TCACGCTGAT CGAACTGATG
ATCGTGGTCG CGATCGTCGG CATTCTGGCC GCCATCGCGC TGCCGGCGTA CAACAACTAC
ATGATCAAGT CGAAGCTGAC GGAAGCGACG ACGCTGATGG ACTCGTTCCG TTCTGCGCTG
TCGGAAGCTT TCGCCAACAA CGGCAACTCG TTCCCGGTCG CTTCGCCGAT TAGCCTTACC
ACGCCGGGCA ACACCAAGTA CGTCGGCGGT ATCACGTACA ACCCGACCGC TGGCGCGACG
CCCAACAACG TGAGCGTGAC TTTCCAGGTT GGCAGCACCG GGGCGGCCGC TATCGACGGC
AAGTATCTGG GGCTCTTCGG GATTGGCCGC GCTGACGGCA CGGTGCAGTG GGTTTGCGGC
ACGGCGACCA ACGGTGGCGC ATCGGCAGCT GGCGCAACGA TGTCCGCGAT GTTCCCATAC
CTGCCGGCAG CTTGCCAAAA CTAA
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| Protein sequence | MKSMRLNKRV QKGFTLIELM IVVAIVGILA AIALPAYNNY MIKSKLTEAT TLMDSFRSAL
SEAFANNGNS FPVASPISLT TPGNTKYVGG ITYNPTAGAT PNNVSVTFQV GSTGAAAIDG
KYLGLFGIGR ADGTVQWVCG TATNGGASAA GATMSAMFPY LPAACQN
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