| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0454 |
|---|
| Symbol | |
|---|
| ID | 8018080 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 480638 |
|---|
| End bp | 481345 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644829234 |
|---|
| Product | two component transcriptional regulator, winged helix family |
|---|
| Protein accession | YP_002980432 |
|---|
| Protein GI | 241662072 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATCC TGATTGCCGA AGACGACGCC ACGCTGGCGG ACGGGCTCAC ACGCTCGCTG
CGCCAGGCGG GCTACGCCGT CGACCAAGCC TCCGATGGGG CGACTGCCGA CGCGGCGCTG
TCCGCGCAAA CGGCCCAGAC CTATGACCTG CTGATCCTCG ACGTGGGACT GCCGCGTATG
TCGGGGCTGG AGGTCCTCAA GCGCCTGCGC TCGCGCGGGG CCATGCTGCC GGTGCTGATT
CTGACCGCCG CCGACAGCGT GGAAGAACGC GTCAAGGGCC TGGACCTGGG CGCCGACGAC
TACATGGCCA AACCGTTCGC GCTGTCCGAG CTGGAAGCGC GCGTGCGTGC GCTGGTGCGG
CGCGGCACGG GCGGCGGTGC CACGCTCGTG CGCCATGGGC CGCTGGCGTT CGATCAGGTC
GGGCGCATTG CCTATATCCA TGATCAGGTG GTGGAACTGT CGGCGCGCGA GATCGGGCTG
CTGGAGATTC TGCTCGCGCG CGTCGGCCGC CTGGTGTCGA AAGAACAGCT GGTCGACCAC
CTGTGCGGCT GGGGCGAAGA AGTCAGCAAC AACGCCATCG AGGTCTATAT CCACCGCCTG
CGCAAGAAAA TCGAGGTGGA AGGCATCCGC ATCGCTACCG TGCGCGGACT CGGCTACTGC
CTGGAACGCG TGGCCACCCC GACGACCACC GCCGCCGCCC ATGGGTGA
|
|---|
| Protein sequence | MRILIAEDDA TLADGLTRSL RQAGYAVDQA SDGATADAAL SAQTAQTYDL LILDVGLPRM
SGLEVLKRLR SRGAMLPVLI LTAADSVEER VKGLDLGADD YMAKPFALSE LEARVRALVR
RGTGGGATLV RHGPLAFDQV GRIAYIHDQV VELSAREIGL LEILLARVGR LVSKEQLVDH
LCGWGEEVSN NAIEVYIHRL RKKIEVEGIR IATVRGLGYC LERVATPTTT AAAHG
|
|---|
| |