| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0447 |
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| Symbol | |
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| ID | 8018073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 471941 |
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| End bp | 473644 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644829227 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_002980425 |
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| Protein GI | 241662065 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.423925 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACCG TGCAGAGTGC ACCGAACGCG CCCGTCGGGC GTGTACAGCC CGCGCCCATG
ACGAGGGAGG AGAAGAAGGT CATCTTTGCC TCGTCGCTGG GGACGGTGTT CGAGTGGTAC
GACTTTTATC TTTACGGCTC GTTGGCGGCC ATCATCGCCA AGCAGTTCTT CTCGGGTCTG
GACCCCACGG CGGGCTTCAT CTTTGCCCTG CTGGCCTTTG CCGCCGGCTT CCTGGTGCGC
CCGTTCGGCG CGCTGGTGTT CGGCCGCCTG GGCGACATGA TCGGGCGCAA GTACACGTTC
CTGGTGACCA TCGTCATCAT GGGTACGTCG ACGTTCATCG TCGGCCTGCT CCCGTCATAC
GGCACGATTG GCGTTGCCGC GCCGATCATC CTGATCGCGT TGCGCATGCT GCAGGGTCTG
GCGCTGGGCG GTGAGTACGG TGGCGCCGCC ACGTATGTCG CCGAGCACGC GCCGCACGGC
CGCCGCGGTG CCTACACGTC GTGGATCCAG ACGACGGCCA CGCTCGGCCT GTTCCTGTCG
CTGGTCGTCA TCCTGGCCGT GCGCGAACTG ACCGGCAAGG CGTTCGACGA CTGGGGCTGG
CGCATCCCGT TCCTGGTCTC GATCCTGCTG CTCGCCACGT CGGTGTACAT CCGTTTGTCG
ATGAGCGAAT CGCCGGCATT CCAGAAGATG AAGGCAGAGG GCAAGACCTC CAAGGCCCCG
TTGACGGAAG CGTTCGGCCA ATGGCGCAAC CTGAAGATCG TGATCCTGGC GCTGATCGGT
CTGACCGCCG GCCAGGCTGT GGTCTGGTAC ACGGGCCAGT TCTACGCGCT GTTCTTCCTC
ACGCAGGTGC TGAAGGTCGA CGCATTCACG GCCAACGTGC TGATTGCCGT AGCGCTTGCC
ATCGGCACGC CCTTCTTCGT GTTCTTCGGC TCGCTGTCGG ACCGCATCGG CCGCAAGAAG
ATCATCATGG CCGGCTGCCT GCTGGCGGTG GTGACCTACT TCCCGCTGTT CAAGGCGCTC
ACGCACTATG CCAACCCGGC GCTGGAGCGT GCACAGCAGA CCGCGCAGAT CACCATCACG
GTCGATCCGA AGGAGTGCTC GTTCCAGGGC AGCCCGATCG CCCGCGAGGT GGACTTCCGC
TCGTCTTGCG ACATCGCCAA GCGCACGCTA GCGCAGTCGT CGGCCAGCTA CGAGACGGTC
GAAGGCCCGG CCGGCACGGT CGCATCGGTG TCGATCGCGG GTAAGCAGAT CAGCTCGCTC
AACGCCACGC GCACGGCAGA CGGTCAGAGT TTCGACGCCG ACAGCAAGAC GAAGATCGCC
GACTTCAAGA AGCAGGTGAG CGAGTCGCTC AAGGCGGCCA ACTACCCGGC CAAGGCCGAT
CCCGCCCAGA TGAACACGGT CATGGTGCTG GTGATCCTGG TGATCCTGGT GATCTACGTG
ACCATGGTCT ACGGCCCGAT CGCGGCAATG CTGGTGGAGA TGTTCCCGAC GCGCATCCGG
TACTCGTCGA TGTCGCTGCC GTATCACATC GGCAACGGCT GGTTCGGGGG CCTGCTGCCG
ACCATCTCGT TCGCCCTCGT GGCCCAGAAC GGCAATATCT ATCACGGTTT GTGGTACCCG
ATCTGGATCG CGGCCATCAC CTTCGTGATC GGAGTGCTCT TCGTGCGCGA GACCAAGGAT
GTGGATATTT ATCGCAACGA CTGA
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| Protein sequence | MATVQSAPNA PVGRVQPAPM TREEKKVIFA SSLGTVFEWY DFYLYGSLAA IIAKQFFSGL
DPTAGFIFAL LAFAAGFLVR PFGALVFGRL GDMIGRKYTF LVTIVIMGTS TFIVGLLPSY
GTIGVAAPII LIALRMLQGL ALGGEYGGAA TYVAEHAPHG RRGAYTSWIQ TTATLGLFLS
LVVILAVREL TGKAFDDWGW RIPFLVSILL LATSVYIRLS MSESPAFQKM KAEGKTSKAP
LTEAFGQWRN LKIVILALIG LTAGQAVVWY TGQFYALFFL TQVLKVDAFT ANVLIAVALA
IGTPFFVFFG SLSDRIGRKK IIMAGCLLAV VTYFPLFKAL THYANPALER AQQTAQITIT
VDPKECSFQG SPIAREVDFR SSCDIAKRTL AQSSASYETV EGPAGTVASV SIAGKQISSL
NATRTADGQS FDADSKTKIA DFKKQVSESL KAANYPAKAD PAQMNTVMVL VILVILVIYV
TMVYGPIAAM LVEMFPTRIR YSSMSLPYHI GNGWFGGLLP TISFALVAQN GNIYHGLWYP
IWIAAITFVI GVLFVRETKD VDIYRND
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