Gene Rpic12D_0441 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0441 
Symbol 
ID8018066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp465022 
End bp465945 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content67% 
IMG OID644829220 
Producttranscriptional regulator, LysR family 
Protein accessionYP_002980419 
Protein GI241662059 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0317691 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATCA AATGGCTGGA AGACTTCAAG GAACTCGCCA AGACGCGCAG CTTCAGCCGC 
GCCGCCGAGA ACCGCAACGT CACGCACCCC GCATTCGGCC GCCGGATCAA GGCGCTAGAG
GAATGGGTGG GCACCTCGCT AATCGAGCGT AGCGAGCATC CGGTCACGCT CACGGCGGCA
GGGCGCTTGT TTTTGGATGC GGCCGCCAAT GCCGTGGACG GCCTGAACGA TGTGCGCTTG
CTGCTGCGGG AGGCGCAACT GCCCGTGGCG CTCAGGATCG GCACCGGGCG CACGCTGGCG
CGCACCTTCG TCCCCGGCTG GTACGAAACG CTGGCGCGTC AGCGCGGTGT GTTTCCGCTC
AGCGTGACGA CGGGTGGCAC GCAGGAAGGC GTGCTGGCCC TTGCCGATGG CACGGTCGAT
TTGCTGATCG CCTACGCCAG CCCACAGGCC GATGCGCTCC TCGATCCGCG CAAGTACGAC
CATTGCCTGC TGGGCAGCGA GACGCTCGTG CCGGTGAGTG CGCCCGACAA GCGCGGCCGC
CCGCGCTTCA CGCTGCCGGG CTCGGCTGCC GCACCGCTTC CATGGCTGGC CTTTGCGCGT
GGGCTGACAT TGCGGCAGAT GCTCGACAGC CATCTGGCTG CCGCCGATCG GAAGGCGCAT
CTGCAGCCCG TGTTCCAGGC GGATTTTTAC GAAGCGGTGG AAGAGATGGC CCTGCGCGGA
TTCGGCATGG CGTGGCTGCC GTATCGCTTG GCCAGGCCGC ACCTGAACGC GGGTGAACTG
CGCCCCGCTG GCGACGACGC CTGGCATATC CACGTCAACA TCCGCATGAT GCGCGTGCGC
AGCAACCAGA GCGCGTTGCT CGACGAGGTG TGGCAACGGG CGGTCGATAA CGCCAGCGGT
CACGGCCGTA ACGATCTCGC CTGA
 
Protein sequence
MQIKWLEDFK ELAKTRSFSR AAENRNVTHP AFGRRIKALE EWVGTSLIER SEHPVTLTAA 
GRLFLDAAAN AVDGLNDVRL LLREAQLPVA LRIGTGRTLA RTFVPGWYET LARQRGVFPL
SVTTGGTQEG VLALADGTVD LLIAYASPQA DALLDPRKYD HCLLGSETLV PVSAPDKRGR
PRFTLPGSAA APLPWLAFAR GLTLRQMLDS HLAAADRKAH LQPVFQADFY EAVEEMALRG
FGMAWLPYRL ARPHLNAGEL RPAGDDAWHI HVNIRMMRVR SNQSALLDEV WQRAVDNASG
HGRNDLA