| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0434 |
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| Symbol | |
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| ID | 8018059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 457335 |
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| End bp | 459032 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644829213 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_002980412 |
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| Protein GI | 241662052 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.326828 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTTTT CCGAACTCGG CTTGTCAGAC AAGCTGGTAC GTGCCGTGGC CGAACTCGGC
TACGCAGAAC CCACTCCGAT TCAACGCCAG GCCATCCCCG CCATCCTCAA GGGCGGTGAC
CTGCTCGCCG GTGCACAGAC CGGCACCGGC AAGACCGCCG GTTTCACGCT GCCGCTGCTG
CACCGCCTGT CGGCATCGCA GCCCAACAAG GTGCAAACGC CGCAGGGCAT GCGCTTTCCG
ATCCGCGCGC TGGTGCTGAC GCCCACGCGT GAGCTTGCCG CGCAGGTGGA AGAAAGCGTG
CGCGCCTATG GCAAATACCT GCCGCTGAAG TCGATGGTGA TGTTCGGCGG CGTCGGCATC
AACCCGCAGA TCGATGCGCT CAAGCGCGGT GTCGATATCG TCGTGGCCAC GCCGGGCCGC
CTGCTGGACC ACGTCGGCCA GCGCACCATC GATCTGTCCC ACATTGAACT GCTGGTGCTG
GACGAAGCCG ATCGCATGCT GGACATGGGC TTCATCCACG ACATCCGCAA GATCCTCAAC
ATCCTCCCGC CGAAGCGACA GAACCTGCTG TTCTCGGCAA CGTTCTCCGA CGACATTCGC
GAACTGGCCG ATCGCCTGCT GGACAAGCCG GCGCTGATCG AAGTCGCGCG CCGCAACACG
ACCGCCGAAA CAGTCGAACA ACGCATCTAC CCGGTCGACC GAGAGCGCAA GCGCGAACTG
CTGGCCAAGC TCGTGCGCGA CAACGACTGG CACCAGGTGC TGGTCTTCAC GCGCACCAAG
CACGGCGCGA ACCGCCTGGC CGAGCAGCTC ACGCGCGACG GCATTCCCGC GCTGGCCATC
CACGGCAACA AGAGCCAATC GGCGCGCACG CGTGCGCTGA CGGAGTTCAA GGCCGGGACG
CTGCGGGTGC TGGTTGCAAC CGACATCGCT GCGCGCGGTA TCGACATCGA CCAACTGCCG
CACGTGGTCA ACTTCGACCT GCCGAACGTG CCGGAAGACT ACGTGCACCG TATCGGCCGC
ACAGGCCGCG CCGGCGCGCA AGGCGAGGCG ATTTCGCTGG TCTGCGTGGA CGAGCATGGC
TTGCTGCGCG ACATCGAGCG CCTCATCAAG CGCGAACTGC CGCGTACCGT GCTGGAAGGT
TTCGAGCCGG ACCCGTCCAT CGCGGCGGAG CCGATTCCGA ACGGGCGCAA CTCGGCGGGC
CGTGGCGGTA ACGCGCGCGG TGGCCGCCCG GGCGGTGGGC GCAGCCAGCA GCCGCGCCAG
GCCAGCGGCA ACGCTGCGCC GCGCGAGCCG CGGGCTCCGC GTGAGCCTCG TGAGCCGCGT
CGCGAGTCGA GCGGTAACGG TCAGGGTCAG GGTCAGGGTC AGAACCAAGG CCAAGGCCAA
GGCCAAGGCC AAGGCCGCAA TGGTGCCGGC AGCCGCCAGC GTCAGCCGCA AGGTCAACGC
GACGGCCAGG CTGCGCCGAA GCCGCGCAAT GGCCACGGTG CCGGCAACGG CAACGGCCAA
TCGCAGGCGC GCGGCCAGCG CCAGGGCAAC GGTCAAGGCC AGGGCCAAGG CAATGGACAA
GGCGGGCAGG GCGGTCAACA ACGCCGCGCA TCAAACACGC AAGCTGCGCA GCCCGCCCAT
AAGGCACAGC CGGCCAAGCA GCCGTTCAAT GGTTTGTTCG CCAAGGCGGC TGCGTTGCTC
GGCGGCCGTA AAGCCTGA
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| Protein sequence | MSFSELGLSD KLVRAVAELG YAEPTPIQRQ AIPAILKGGD LLAGAQTGTG KTAGFTLPLL
HRLSASQPNK VQTPQGMRFP IRALVLTPTR ELAAQVEESV RAYGKYLPLK SMVMFGGVGI
NPQIDALKRG VDIVVATPGR LLDHVGQRTI DLSHIELLVL DEADRMLDMG FIHDIRKILN
ILPPKRQNLL FSATFSDDIR ELADRLLDKP ALIEVARRNT TAETVEQRIY PVDRERKREL
LAKLVRDNDW HQVLVFTRTK HGANRLAEQL TRDGIPALAI HGNKSQSART RALTEFKAGT
LRVLVATDIA ARGIDIDQLP HVVNFDLPNV PEDYVHRIGR TGRAGAQGEA ISLVCVDEHG
LLRDIERLIK RELPRTVLEG FEPDPSIAAE PIPNGRNSAG RGGNARGGRP GGGRSQQPRQ
ASGNAAPREP RAPREPREPR RESSGNGQGQ GQGQNQGQGQ GQGQGRNGAG SRQRQPQGQR
DGQAAPKPRN GHGAGNGNGQ SQARGQRQGN GQGQGQGNGQ GGQGGQQRRA SNTQAAQPAH
KAQPAKQPFN GLFAKAAALL GGRKA
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