| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0414 |
|---|
| Symbol | |
|---|
| ID | 8018039 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 431407 |
|---|
| End bp | 431985 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644829193 |
|---|
| Product | D,D-heptose 1,7-bisphosphate phosphatase |
|---|
| Protein accession | YP_002980392 |
|---|
| Protein GI | 241662032 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0241] Histidinol phosphatase and related phosphatases |
|---|
| TIGRFAM ID | [TIGR00213] D,D-heptose 1,7-bisphosphate phosphatase
[TIGR01656] histidinol-phosphate phosphatase family domain
[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCACG TTCCAAAACT GGTGATTCTC GACCGCGATG GCGTGATCAA CCGAGACAGC
GACCAGTTCA TCAAGTCGCC TGACGAGTGG ATCGCGCTCG ACGGCAGCCT GGAAGCCATA
GCCGAGCTGA ACCAGGCCGG CTACCAGGTG GTGGTGGCGA CCAACCAGTC GGGTATCGGG
CGCGGCCTGT TCGAGGCCGC CGCGCTGAAC GCCATGCACG AGAAGATGTA CAAGGCGCTT
GCCACCTCCG GCGGGCGCGT CGATGCCGTC TTCTTCTGCC CGCACACCGC CGCCGATGCC
TGCGAATGCC GCAAGCCCAA GGCCGGCATG CTGCGCGAGA TCGCACGCCG CTTCGACATG
GACCTGACCG GCGTGCCGGT CGTGGGAGAT TCGCTGCGCG ACTTGCAAGC CGGTGTAGAA
GTCGGTGCCG TGCCCCACCT CGTATTGACC GGCAAGGGCG CCAAGACCCG CGATGCCGGA
AACCTGCCCC CAGGTACCCA GATTCACGAG GACCTGCGGG CGTTTGTGCG TGCGCTGCTG
TCTCCCGTGC CCCAGGGCAC GCCCACGCGC GCCCCTTGA
|
|---|
| Protein sequence | MPHVPKLVIL DRDGVINRDS DQFIKSPDEW IALDGSLEAI AELNQAGYQV VVATNQSGIG
RGLFEAAALN AMHEKMYKAL ATSGGRVDAV FFCPHTAADA CECRKPKAGM LREIARRFDM
DLTGVPVVGD SLRDLQAGVE VGAVPHLVLT GKGAKTRDAG NLPPGTQIHE DLRAFVRALL
SPVPQGTPTR AP
|
|---|
| |