Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0413 |
Symbol | |
ID | 8018038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 430643 |
End bp | 431395 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644829192 |
Product | phospholipid/glycerol acyltransferase |
Protein accession | YP_002980391 |
Protein GI | 241662031 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.661287 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTTTA TCCGTTCGCT GCTGTACCTG GTTTTCCTGA TCGTTTGGAC ACCGATTTAC GCGGTGGCCT GCTTCATCGT CTTTCCGTTC ATGAACCCGC ACCGCCGCTT CTGGATGGTG TCCGGCTGGA CAAAGTCTGC AATCTGGATG GCACGCTGGC TGCTCGGCAT CCGCTGGCAA TACCAGGGCT GGGAGAACAT CGAGGAAGCC GTCGCCACCA ACAAACAGGT TGTGCTGCTT TCCAAGCACC AGTCGGCGTG GGAAACCATG GCCTTCGTCG CGACCATGCC GCGCCCGTTG TGCTACGTCT TCAAGCGCGA GCTGCTGTTT GTGCCGTTCT TCGGGTGGGC GCTCGGCATG CTCAAAATGG TGCACATCAA CCGCAAGGAC GGCGCCAATG CGTTCGCCTC GGTCGCGCGC CAGGGCAAGG AGCGCCTTGC AGATGGCGCG TGGGTGATCA TGTTTCCGGA AGGCACGCGC ACGCGTTCGG GCGACCCCAA GCCGCGTTAC AAGAGCGGCG GTGCGCGCTT TGCCGTGGAT ACCGGCGCAT GGGTCATCCC CATCGCGCAC AACTCCGGCC GTGTGTGGCC GCGCAATTCG TTCCTGAAGC ATCCGGGCCT GATTACGCTG TCGGTCGGAC CGGCCATCTC GAGCGCCGGC AAAACCAGCG ACGAACTCAA TCGCGAAGTC GAAGCGTGGA TCGAAACAGA AATGCGTAGA ATCGACGCCG ACAGCTACCG CGAGCACGCA TGA
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Protein sequence | MTFIRSLLYL VFLIVWTPIY AVACFIVFPF MNPHRRFWMV SGWTKSAIWM ARWLLGIRWQ YQGWENIEEA VATNKQVVLL SKHQSAWETM AFVATMPRPL CYVFKRELLF VPFFGWALGM LKMVHINRKD GANAFASVAR QGKERLADGA WVIMFPEGTR TRSGDPKPRY KSGGARFAVD TGAWVIPIAH NSGRVWPRNS FLKHPGLITL SVGPAISSAG KTSDELNREV EAWIETEMRR IDADSYREHA
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