Gene Rpic12D_0413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0413 
Symbol 
ID8018038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp430643 
End bp431395 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content61% 
IMG OID644829192 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_002980391 
Protein GI241662031 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID[TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.661287 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTTTA TCCGTTCGCT GCTGTACCTG GTTTTCCTGA TCGTTTGGAC ACCGATTTAC 
GCGGTGGCCT GCTTCATCGT CTTTCCGTTC ATGAACCCGC ACCGCCGCTT CTGGATGGTG
TCCGGCTGGA CAAAGTCTGC AATCTGGATG GCACGCTGGC TGCTCGGCAT CCGCTGGCAA
TACCAGGGCT GGGAGAACAT CGAGGAAGCC GTCGCCACCA ACAAACAGGT TGTGCTGCTT
TCCAAGCACC AGTCGGCGTG GGAAACCATG GCCTTCGTCG CGACCATGCC GCGCCCGTTG
TGCTACGTCT TCAAGCGCGA GCTGCTGTTT GTGCCGTTCT TCGGGTGGGC GCTCGGCATG
CTCAAAATGG TGCACATCAA CCGCAAGGAC GGCGCCAATG CGTTCGCCTC GGTCGCGCGC
CAGGGCAAGG AGCGCCTTGC AGATGGCGCG TGGGTGATCA TGTTTCCGGA AGGCACGCGC
ACGCGTTCGG GCGACCCCAA GCCGCGTTAC AAGAGCGGCG GTGCGCGCTT TGCCGTGGAT
ACCGGCGCAT GGGTCATCCC CATCGCGCAC AACTCCGGCC GTGTGTGGCC GCGCAATTCG
TTCCTGAAGC ATCCGGGCCT GATTACGCTG TCGGTCGGAC CGGCCATCTC GAGCGCCGGC
AAAACCAGCG ACGAACTCAA TCGCGAAGTC GAAGCGTGGA TCGAAACAGA AATGCGTAGA
ATCGACGCCG ACAGCTACCG CGAGCACGCA TGA
 
Protein sequence
MTFIRSLLYL VFLIVWTPIY AVACFIVFPF MNPHRRFWMV SGWTKSAIWM ARWLLGIRWQ 
YQGWENIEEA VATNKQVVLL SKHQSAWETM AFVATMPRPL CYVFKRELLF VPFFGWALGM
LKMVHINRKD GANAFASVAR QGKERLADGA WVIMFPEGTR TRSGDPKPRY KSGGARFAVD
TGAWVIPIAH NSGRVWPRNS FLKHPGLITL SVGPAISSAG KTSDELNREV EAWIETEMRR
IDADSYREHA