Gene Rpic12D_0405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0405 
Symbol 
ID8018030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp421197 
End bp422270 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content67% 
IMG OID644829184 
Productaminoglycoside phosphotransferase 
Protein accessionYP_002980383 
Protein GI241662023 
COG category[R] General function prediction only 
COG ID[COG3178] Predicted phosphotransferase related to Ser/Thr protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCGA CCCCTGGCGC CGCAGCAGGC GCAACCGACG CACGCCTCAG CCAACTGCGC 
GACTGGCTCG GCACATTGCC CGCCGCCGAC GGCCTGCGCA TCGACACGCT GCAACCTGCT
TCGGCCGATG CCAGCTTCCG CCGGTATTTC CGCCTGGACA GCGCCGTCAG TGGCAAGCCC
GGCACGCTGG TCGTCATGGA CGCCCCGCCG CCGCAGGAAG ACTGCCGCCC GTTCGTCCAT
GTGGCTGGCC TGCTCAACGG CGCCGGCGTG CGTGCGCCGC AGGTGCTGGA GCAGGATCTC
GCGCAGGGCT TCCTGCTGCT GACCGACCTG GGCCCACAAA CGTATCTGCA ATCGCTGCGC
GAGCGCGATT TCGACCTCGC CTACGCCAAC ACGTTGTTCC GCCCTGCCAT CCATACGCTG
GTGCGCTGGC AGTTGGCCTC CCGCGAAGGC GAGCTGCCGC CGTATGACGA GGCGTTGCTG
CGCCGCGAAC TGTCGCTGTT TCCGGACTGG TACGTCGACC GCCACCTGCA ACGCCCGCTC
GACGCCACCC AGCGCGAATC GCTCGACAAG GTGTTCAAGC TGCTGGTCGA CAGCGCCTTG
GCCCAGCCGC GCGTGTACGT GCATCGTGAC TACATGCCCC GTAACCTGAT GATCAACGCG
GCCGACCCAT CGCAGCCGGG CGTGTTGGAC TTCCAGGACG CCGTCTATGG GCCGATCACC
TACGACGCCG CCTCGCTGCT GCGCGACGCC TTCCTGTCGT GGGACGAAGA GCAGGAGCTG
GATTGGGCCG TGCGGTACTG GGAAGCGGCC CGCGCCGCCA AGCTGCCGGT GGATGAAGAC
TTCGGCGAGT TCTACCGTGC GCTCGAATGG ATGGGCGCGC AACGCCATCT GAAGGTGGCG
GGCATCTTCG CGCGCCTGTG CTACCGCGAC GGCAAGACCG GCTACGTGGA AGACACTCCG
CGCTTCATCG CCTACCTGCG CCGTGTATGC AGCCGCTACA ACGCGCTGGC GCCGCTGGCC
CGCCTGCTTG ATCAACTCGA AGATCGCACG CAGCAGATCG GCTACACGTT CTGA
 
Protein sequence
MASTPGAAAG ATDARLSQLR DWLGTLPAAD GLRIDTLQPA SADASFRRYF RLDSAVSGKP 
GTLVVMDAPP PQEDCRPFVH VAGLLNGAGV RAPQVLEQDL AQGFLLLTDL GPQTYLQSLR
ERDFDLAYAN TLFRPAIHTL VRWQLASREG ELPPYDEALL RRELSLFPDW YVDRHLQRPL
DATQRESLDK VFKLLVDSAL AQPRVYVHRD YMPRNLMINA ADPSQPGVLD FQDAVYGPIT
YDAASLLRDA FLSWDEEQEL DWAVRYWEAA RAAKLPVDED FGEFYRALEW MGAQRHLKVA
GIFARLCYRD GKTGYVEDTP RFIAYLRRVC SRYNALAPLA RLLDQLEDRT QQIGYTF