Gene Rpic12D_0396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0396 
Symbol 
ID8018021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp411742 
End bp411975 
Gene Length234 bp 
Protein Length77 aa 
Translation table11 
GC content60% 
IMG OID644829175 
ProductDNA-binding protein Fis 
Protein accessionYP_002980374 
Protein GI241662014 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG2901] Factor for inversion stimulation Fis, transcriptional activator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.470753 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCA ACCCGATCGA ACGTTGCATC CGCGACAGCC TGGATGCGTA TTACCGTGAC 
CTGGACGGCG AAAACCCGTC CAACGTCTAC GACATGGTGC TGCAGGCCAT CGAGCGGCCG
CTGCTGGAAA CCGTGATGGA ATGGGCTTCC AACAACCAGT CGCAGGCGGC CGACTACCTC
GGCATCAACC GCAATACGCT GCGCAAGAAG TTGCAGCAGC ACGGCCTCAT CTGA
 
Protein sequence
MSRNPIERCI RDSLDAYYRD LDGENPSNVY DMVLQAIERP LLETVMEWAS NNQSQAADYL 
GINRNTLRKK LQQHGLI