Gene Rpic12D_0395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0395 
SymbolpurH 
ID8018020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp410071 
End bp411645 
Gene Length1575 bp 
Protein Length524 aa 
Translation table11 
GC content65% 
IMG OID644829174 
Productbifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 
Protein accessionYP_002980373 
Protein GI241662013 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0138] AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) 
TIGRFAM ID[TIGR00355] phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.577908 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCAGC AAGCCCTGCT TTCCGTTTCC GACAAGACCG GCATCGTCGA CTTTGCCCGT 
GCCCTGCACG AGCGCGGCGT CAAGCTCCTC TCCACCGGCG GCACCGCCAA GCTGCTCGCC
GAATCCGGCT TGCCCGTAAC GGAAGTGGCG GACTACACCG GCTTCCCGGA AATGCTCGAT
GGCCGCGTCA AGACGCTGCA CCCGAAGGTG CACGGCGGCA TCCTGGCCCG CCGCGACCTG
CCTGAGCACA TGGCGGCGCT GTCCGAACAC AGCATCCCGA CCATCGACCT GCTGGTGGTG
AACCTGTACC CGTTCCAGCA GACGGTGGCC AAGGACGAAT GCACGCTGGT CGACGCCATC
GAGAACATCG ACATCGGCGG CCCGACCATG CTGCGCTCGG CGGCCAAGAA CCATCGCGAC
GTGACGGTGA TCGTCGATCC GGCCGACTAC GCCACCGTGC TGGCCGAAAT GCAAGCCAAC
AACAACACGG TCGGCTACGA GACCAACTTC ATGCTGGCCA AGAAGGTGTT TGCGCACACC
GCCCAGTACG ACGGCGCGAT CACCAACTAC CTGACGAGCC TCGGCGCCGA CAAGTCGCAC
AGCACGCGCA GCGCCTATCC GCAAACGCTG AACCTCGCCT TCGAAAAGGT GCAGGAGATG
CGCTACGGCG AGAACCCGCA CCAATCCGCC GCCTTCTATC GCGACCTGAA GGCCGTCGAC
GGCGCGCTCG CCAACTACAC GCAACTGCAG GGCAAGGAGC TGTCGTATAA CAACATCGCC
GACGCCGATG CGGCGTGGGA ATGCGTGAAG TCGTTCGACC CGGCCAAGGG TGCTGCGTGC
GTCATCATCA AGCACGCCAA CCCTTGCGGC GTGGCCATCG GCGTCACCGC CCAAGAGGCG
TATGAGAAGG CGTTCAAGAC CGACTCCACC TCCGCCTTCG GCGGCATCAT CGCCTTCAAC
GTGCCGCTGG ATGATGCGGC CGCACAGGTG GTGGCTAAAC AGTTCGTAGA AGTGCTGATC
GCCCCGGGCT TCTCGGAAGG CGCACGTGCC GTGTTCGCGG GCAAGCAGAA CGTCCGCGTG
CTGGAAATTC CGCTCGGCAA GGGCGTCAAC GCATTCGACT TCAAGCGCGT TGGCGGCGGC
CTGCTGGTGC AGAGCCCGGA TGCCAAGAAC GTGCAGCCGA GCGAGCTGCG CGTGGTCACC
AAGCGCCACC CGACGCCGAA GGAAATGGAC GATCTGATGT TTGCCTGGCG CGTCGCCAAG
TTCGTCAAGT CCAACGCCAT CGTGTTCTGC GGCGGCGGCA TGACGCTGGG CGTGGGCGCC
GGCCAGATGA GCCGTGTGGA CTCGGCCCGC ATCGCCAGCA TCAAGGCGCA GAACGCCGGC
CTGACGCTGG CCGGTTCGGC TGTGGCATCG GATGCGTTCT TCCCGTTCCG CGACGGCCTG
GACGTGGTGG TCGATGCTGG CGCCTCCTGC GTGATCCAGC CGGGCGGCTC GGTACGCGAC
GATGAAGTGA TCGCCGCCGC CGACGAGCGC AACGTGGCGA TGATCTTCAC CGGCACCCGC
CACTTCCGCC ACTAA
 
Protein sequence
MIQQALLSVS DKTGIVDFAR ALHERGVKLL STGGTAKLLA ESGLPVTEVA DYTGFPEMLD 
GRVKTLHPKV HGGILARRDL PEHMAALSEH SIPTIDLLVV NLYPFQQTVA KDECTLVDAI
ENIDIGGPTM LRSAAKNHRD VTVIVDPADY ATVLAEMQAN NNTVGYETNF MLAKKVFAHT
AQYDGAITNY LTSLGADKSH STRSAYPQTL NLAFEKVQEM RYGENPHQSA AFYRDLKAVD
GALANYTQLQ GKELSYNNIA DADAAWECVK SFDPAKGAAC VIIKHANPCG VAIGVTAQEA
YEKAFKTDST SAFGGIIAFN VPLDDAAAQV VAKQFVEVLI APGFSEGARA VFAGKQNVRV
LEIPLGKGVN AFDFKRVGGG LLVQSPDAKN VQPSELRVVT KRHPTPKEMD DLMFAWRVAK
FVKSNAIVFC GGGMTLGVGA GQMSRVDSAR IASIKAQNAG LTLAGSAVAS DAFFPFRDGL
DVVVDAGASC VIQPGGSVRD DEVIAAADER NVAMIFTGTR HFRH