Gene Rpic12D_0392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0392 
SymbolruvA 
ID8018017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp407541 
End bp408122 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content67% 
IMG OID644829171 
ProductHolliday junction DNA helicase RuvA 
Protein accessionYP_002980370 
Protein GI241662010 
COG category[L] Replication, recombination and repair 
COG ID[COG0632] Holliday junction resolvasome, DNA-binding subunit 
TIGRFAM ID[TIGR00084] Holliday junction DNA helicase, RuvA subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.938201 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGAC GCATCGCCGG GACGCTGATC GAAAAGAACC CGCCGCACCT GCTGGTCGAT 
TGCCACGGCG TCGGCTACGA AATCGACGTG CCGATGAGCA CCTTCTACAA CCTCCCCGCC
ACCGGCGAGA AGGTCGTCCT GCTCACGCAG CAGATCGTGC GCGAGGATGC GCACCTGCTC
TACGGTTTCG GCACCGCCGC CGAGCGTGAA ACCTTCCGCC AGCTCATCAA GATTTCCGGC
ATCGGCGCGC GCATTGCGCT GGCGGTGCTG TCGGGCATGT CGGTGGCCGA ACTCGCGCAG
GCCGTCACGC TGCAGGAAGC CGGGCGCCTG ACGCGCATCC CGGGCATCGG CAAGAAGACG
GCCGAGCGCC TGCTGCTCGA ACTCAAGGGC AAGCTTGGCG CCGATCTGGG TGCGGTGCCC
GGCGGCCCCG CCGTCTCGGA CGACGCGGTC GACGTGCTCA ACGCCCTGCT GGCACTAGGG
TATTCCGACA AGGAGGCGGC GCTCGCCATC AAGCAGGTGC CGGCCGGCAC GGGCGTATCC
GAGGGGATCA AGCTAGCGCT CAAGGCGCTG TCCAAAGGCT GA
 
Protein sequence
MIGRIAGTLI EKNPPHLLVD CHGVGYEIDV PMSTFYNLPA TGEKVVLLTQ QIVREDAHLL 
YGFGTAAERE TFRQLIKISG IGARIALAVL SGMSVAELAQ AVTLQEAGRL TRIPGIGKKT
AERLLLELKG KLGADLGAVP GGPAVSDDAV DVLNALLALG YSDKEAALAI KQVPAGTGVS
EGIKLALKAL SKG