| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0390 |
|---|
| Symbol | |
|---|
| ID | 8018015 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 405669 |
|---|
| End bp | 406385 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644829169 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002980368 |
|---|
| Protein GI | 241662008 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1738] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00697] conserved hypothetical integral membrane protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0293125 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGCCG CCCCGCACCA CCCGAATCGC ACGTTCCGAT ACTACGACTT CATCATGGCG
GCCTTCGTCA CAGTGCTGCT GTGCTCGAAC CTGATCGGCG CGTCCAAGGC GGCGCAGGTC
ACGTTACCGG TGCTCGGATC GGTCACCTTC GGCGCTGGCG TGCTGTTCTT TCCAATTTCC
TACATCTTCG GCGACATCCT CACCGAGGTG TACGGTTACG GGCGTGATCG GCGCGTGGTG
TGGGCGGGCT TTGCCGCACT GATCTTTGCG TCGTTCATGT CGCTGGTCGT GCTGGCGCTA
CCGGTGGCGC CCTTCATGGC CGGTTATCAG AAGAGCCTGA ACGACGTGTT CGGCAACACG
CCGCGCATCG TCGCCGGGTC GCTCATTGCG TTCTGGTGCG GCAGCTTCGC CAACAGCTAC
ACGCTGGCGA AGATGAAGAT CGCGACGGAA GGAAAATGGC TGTGGACGCG CATCGTCGGA
TCCACCGTGG TGGGCGAGGC GGTCGATTCG TCGCTGTTCT ACGTGATCGC CTTCTACGGC
ATCTGGCCCC ACGAACAGGT GCTGCGTGTC GCCATTGCGC AATACATCCT CAAGACTGGC
TGGGAAATCG TCGCAACGCC GCTCACCTAC CGCGTCGTCG CCTTCCTCAA GCGCGCCGAG
AACGAGGATT ACTACGACCG CGACACCAAC TTCACGCCGT TCCGGCTGAA GGTTTAA
|
|---|
| Protein sequence | MSAAPHHPNR TFRYYDFIMA AFVTVLLCSN LIGASKAAQV TLPVLGSVTF GAGVLFFPIS
YIFGDILTEV YGYGRDRRVV WAGFAALIFA SFMSLVVLAL PVAPFMAGYQ KSLNDVFGNT
PRIVAGSLIA FWCGSFANSY TLAKMKIATE GKWLWTRIVG STVVGEAVDS SLFYVIAFYG
IWPHEQVLRV AIAQYILKTG WEIVATPLTY RVVAFLKRAE NEDYYDRDTN FTPFRLKV
|
|---|
| |