Gene Rpic12D_0388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0388 
Symbol 
ID8018013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp404460 
End bp404972 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content67% 
IMG OID644829167 
ProductD-tyrosyl-tRNA(Tyr) deacylase 
Protein accessionYP_002980366 
Protein GI241662006 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1490] D-Tyr-tRNAtyr deacylase 
TIGRFAM ID[TIGR00256] D-tyrosyl-tRNA(Tyr) deacylase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.140609 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTGGAC TGATCCAGCG TGTGTCCGAA GCGGCGGTCC GTGTGGACGG CCGCGTCGTC 
GGCGAGATCG GCCCGGGGCT GCTCGCGCTT GTCTGTGCGG AGCGCGGTGA CACCGCTGCA
GAGGCCGATC GTCTGCTCGA GAAGCTGCTG AACTACCGCG TCTTCTCCGA CGCGCAGGGC
AAGATGAACC TGCCCGTGCG CAATATCGAC GGCAACGGGC AGGCAGGCGG CTTGCTGGTG
GTGTCGCAGT TCACGCTGGC GGCCGATACC AAGTCCGGCA CGCGGCCGAG CTTTACCCCC
GCCGCGCCGC CGGAAGATGG CCGCCGCCTG TACGAACACT TCGTGGCGCG CGCGCGTGCG
CAGCACCCGA TCGTGGCGAC CGGCGAGTTT GGTGCCGACA TGAAGGTGTC GCTCGTCAAC
GATGGCCCGG TCACGTTTTG GTTGCAGGTT GCGCCGCAAG CTGCTGCATC TGCTGCAAAG
ACAGCCACGC CGGACGTGGC CAAATCTGTC TGA
 
Protein sequence
MIGLIQRVSE AAVRVDGRVV GEIGPGLLAL VCAERGDTAA EADRLLEKLL NYRVFSDAQG 
KMNLPVRNID GNGQAGGLLV VSQFTLAADT KSGTRPSFTP AAPPEDGRRL YEHFVARARA
QHPIVATGEF GADMKVSLVN DGPVTFWLQV APQAAASAAK TATPDVAKSV