Gene Rpic12D_0386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0386 
SymbolanmK 
ID8018011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp401868 
End bp403022 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content68% 
IMG OID644829165 
Productanhydro-N-acetylmuramic acid kinase 
Protein accessionYP_002980364 
Protein GI241662004 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2377] Predicted molecular chaperone distantly related to HSP70-fold metalloproteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.222355 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCATC CGAACCACAC CGCACTCTCT ACCGATCGCT ACATCGGCCT CATGTCGGGC 
ACCAGCCTGG ATGGCGTCGA TGGCGTACTG GCGGACTTTT CCGGCGAAAC CCCGACCGTC
CTCGCCGACG CGTACGTGCC CTTCTCGCCC GAGTTGCGCC AGCGCTTCCT GGACCTGCAA
CACGCCGGCC ACGACGAGAT CCATCGTGAG GCGCTGGCCG CCAATGCGCT GGCCATGGCC
TACGCCGACT GCGTTGCCCG ACTGCTTGCC GCAACCGGCC TGGCCGCGCA GGACGTGCGG
GCCATCGGCG CGCACGGGCA GACCATCCGT CATCAGCCCG GCACCCACGA TGGCATCGGC
TACACGCGCC AAACGCAGCA CCCGGCGGTG TTGGCCGAGC GCACCGGCAT CGATGTCATT
GCCGATTTTC GCAGTCGCGA CATCGCCGCC GGCGGCCAAG GCGCCCCCCT CGTTCCGGCA
CTGCATCGCG CGCTGTTCGG CCTGCCCGAT GCGTGGCGAG TGGTCTGCAA CATTGGCGGC
ATCGCCAACC TCACGATCTT GCCGCCGCAG GCCTCCAACG CGCGCGACGC CGTACTTGGC
TTCGACTGCG GCCCGGGCAA CGCGCTGATG GACTATTGGG TTCACATGCA CCGCGATACC
CGCTACGACG CCGACGGCGC CTGGGCCCGC AGCGGACACG TCGACGAGAT GCTCCTTGCG
CGCTTGAAGG CTGAACCGTT CTTCGCGGCG CTGCCGCCCA AGAGCACCGG CCGCGACCTG
TTCAACCCGG CATGGCTGCA ACAAATCCTC GGCGATGCGC TGAACACCGC GCGCCCCGAA
GATGTTCAAG CCACGCTGCT CGCGCTCACG GCGGACACCA TCACCGATGC CGTACATACC
CATGCGGCAC AGGCGGCGTC ACTACTGGTC TGTGGTGGTG GCGCCCGCAA CGGCGCGCTG
ATGGCACGCA TCGCGCAGCA ATTACCGGGG GTGCAAGTCG CTCCGACGGA GGTGTTCGGT
GTGCCCGCAC ATCAGGTGGA GGCGCTCGCA TTCGCGTGGC TCGCGCGCCA GTGCCTGCTC
CGCGCCCACG GCAATCTGCA CACCGCGACC GGCGCATCGG GCGGTCGCAT CCTCGGCGCG
ATCTACCCGG CTTGA
 
Protein sequence
MSHPNHTALS TDRYIGLMSG TSLDGVDGVL ADFSGETPTV LADAYVPFSP ELRQRFLDLQ 
HAGHDEIHRE ALAANALAMA YADCVARLLA ATGLAAQDVR AIGAHGQTIR HQPGTHDGIG
YTRQTQHPAV LAERTGIDVI ADFRSRDIAA GGQGAPLVPA LHRALFGLPD AWRVVCNIGG
IANLTILPPQ ASNARDAVLG FDCGPGNALM DYWVHMHRDT RYDADGAWAR SGHVDEMLLA
RLKAEPFFAA LPPKSTGRDL FNPAWLQQIL GDALNTARPE DVQATLLALT ADTITDAVHT
HAAQAASLLV CGGGARNGAL MARIAQQLPG VQVAPTEVFG VPAHQVEALA FAWLARQCLL
RAHGNLHTAT GASGGRILGA IYPA