Gene Rpic12D_0384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0384 
Symbol 
ID8018009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp400897 
End bp401301 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content61% 
IMG OID644829163 
Productprotein of unknown function DUF583 
Protein accessionYP_002980362 
Protein GI241662002 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1664] Integral membrane protein CcmA involved in cell shape determination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.215983 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTTTG GCAAAAAGAA AGGGCTAGCG ATCGAAACGC TACTGGGTGC CCGTACCAAG 
CTGGAGGGGG ATCTGCGTTT CTCGGGCGGT CTGCGGATTG ACGGCGAGAT CAAGGGCAAC
ATCTACGGCG ATCCTGACAA GCCCAGCATG TTGGTGATTA CCGACAGTGC GCGTGTCGAG
GGGGAGGTGC ACGTCGGCCA TCTGATCCTG AACGGAACGG TGGTTGGCCC GGTGCACGTG
GCGGAGCTGC TGGAACTGCA ACCGAAGGCG CGCATTGAGG GCAACGTCCA ATATGCGGCG
CTGGAAATGC ACCAAGGTGC AGTCGTCATG GGCACGCTGA CGCACGCGGC GCCTGGCGAT
GTGAAGCTGC TGCCCAACCT CAAGCTGGCC TCCAACCAGG ATTGA
 
Protein sequence
MLFGKKKGLA IETLLGARTK LEGDLRFSGG LRIDGEIKGN IYGDPDKPSM LVITDSARVE 
GEVHVGHLIL NGTVVGPVHV AELLELQPKA RIEGNVQYAA LEMHQGAVVM GTLTHAAPGD
VKLLPNLKLA SNQD