| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0381 |
|---|
| Symbol | rplM |
|---|
| ID | 8018006 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 399034 |
|---|
| End bp | 399462 |
|---|
| Gene Length | 429 bp |
|---|
| Protein Length | 142 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644829160 |
|---|
| Product | 50S ribosomal protein L13 |
|---|
| Protein accession | YP_002980359 |
|---|
| Protein GI | 241661999 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0102] Ribosomal protein L13 |
|---|
| TIGRFAM ID | [TIGR01066] ribosomal protein L13, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00368247 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACCT TTTCCGCAAA GCCCCATGAG GTGAAGCGCG ATTGGTACGT GATTGACGCG
ACGGACAAGG TCCTCGGGCG TGTCGCCAGC GAAGTGGCAC ACCGACTGCG CGGCAAGCAC
AAGCCCGAAT TCACTCCGCA CGTCGATACC GGCGATTTCA TCATCGTCAT CAACGCAGCC
AAGCTGCGCG TGACGGGCGC CAAGACGACC GACAAGAAGT ACTATCGCCA CTCGGGTTAC
CCGGGCGGTA TCTACGAAAC GACGTTTGGC AAGATGCAGC AGCGTTTCCC GGGCCGTGCC
CTGGAAAAGG CTGTGAAGGG CATGCTGCCG AAGGGTCCGC TGGGCTACGC GATGATCAAG
AAGCTGAAAG TTTACGCCGA AGGCTCGCAT CCGCACGAAG CTCAGCAGCC GAAAGCGCTG
GAAATCTAA
|
|---|
| Protein sequence | MKTFSAKPHE VKRDWYVIDA TDKVLGRVAS EVAHRLRGKH KPEFTPHVDT GDFIIVINAA
KLRVTGAKTT DKKYYRHSGY PGGIYETTFG KMQQRFPGRA LEKAVKGMLP KGPLGYAMIK
KLKVYAEGSH PHEAQQPKAL EI
|
|---|
| |