Gene Rpic12D_0379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0379 
Symbol 
ID8018003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp396733 
End bp397530 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content67% 
IMG OID644829158 
Productputative transmembrane protein 
Protein accessionYP_002980357 
Protein GI241661997 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0494344 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAATGCT TGGGTGCGAT CGATTGGAGC CATCCGGCGT TCGCACCGCT CGCTGCAGTG 
GGCGCGCCGC TTGCAGAGGC AATCTCGCGT GGCGCCGATC TTCGAGACGC ACTGAACGCA
CAGCCGGCGG CACAAGCGAT CCGCACGTGC AGCGGCCATG CTCTGCGCTT CGTCCCGCAA
GATGCACTGC CGGCCGGCGC CGCGTACGAA GCACACATCG CCGCCACCGG CCAGGTGCCG
ACGCGGGACA ATCTCCACGA CTTTTTCAAC GCCCTGATCT GGCTGCATTG GCCGCGTGCG
AAGGCAGCGC TCAACGCGCG CCAGGCGCGG GCGATCACGC AGGACGGGAT TGGCGCGGCA
CGCGGCACCG TCCGCGATGC CGCCACGCTG TTCGACGAAA ACGCTCTGAT CTTCGTGCAC
ACCGAAGACG CGCCGGAGCG CTGTCTGACC GGATTCGACT GGCGCGGCTT GTTCGTCGAG
GGCAGGGCTG CGTGGGGCGC CACGTGCGCC GTTCTGCCGT TTGGTCACGC AGTCTTGGAA
AAGCTGGTCG CGCCTTACAA GTCGATCACC GCACATGCGT GGCCAGTGCG CGTGGCTGCG
TTGCCGGCGA ACCGCCCCTC GCTAGACGCT GCGCTGGCCG CGACGCTCCT GCACGCCGAT
CTCGCGCCGG GCAATTTCCG TCCGTTGCCC GTCATGGGGA TCCCCGGGTG GTGCGATGCC
AACGAAGACG CCGGCTTCTA TCTGGACACG TCAGTCTTTC GCCCGGGCCG GCGGCGATTC
TTACCTGAAC AGTGCTAG
 
Protein sequence
MECLGAIDWS HPAFAPLAAV GAPLAEAISR GADLRDALNA QPAAQAIRTC SGHALRFVPQ 
DALPAGAAYE AHIAATGQVP TRDNLHDFFN ALIWLHWPRA KAALNARQAR AITQDGIGAA
RGTVRDAATL FDENALIFVH TEDAPERCLT GFDWRGLFVE GRAAWGATCA VLPFGHAVLE
KLVAPYKSIT AHAWPVRVAA LPANRPSLDA ALAATLLHAD LAPGNFRPLP VMGIPGWCDA
NEDAGFYLDT SVFRPGRRRF LPEQC