| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0374 |
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| Symbol | |
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| ID | 8017998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 391768 |
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| End bp | 392451 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644829153 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_002980352 |
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| Protein GI | 241661992 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.49013 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTATC AATTCGATTT CTCGTCCATC AACGTCGACA ACATGCGCGT GCTCGGCGAG
GGCATGCTCC TTTCGCTCGA GATCACAGGC ACGGCCATCC TGGTCGGCAT CGTGTGGGGC
ACGCTGCTGG CGATGATGCG CCTGTCGGGC ATAAAGCCGC TGCAGGTGTT CGGGCAGGCG
TACGTGAACC TCTTCCGGTC CATCCCGCTG GTGATGGTGC TGCTGTGGTT CTTCCTGATC
GTGCCGCAGG TACTGCAGAA AATCTTCAAC CTGTCGCCGG CCACCGACAT GCGCATGACG
TCCGCGCTGG TCGCCTTCGC GCTGTTTGAA GCGGCGTACT ACTCGGAGAT CATCCGCGCC
GGTATCCAGA GCGTCTCGCG CGGGCAGATG TTCGCCGCCT ACGCGATGGG TATGACGTAC
GGCCAGGCCA TGCGCCTGGT GATCCTGCCG CAGGCATTCC GCAACATGAT TCCGTTGCTG
CTCACCCAGG CCATCGTCCT GTTCCAGGAT ACGTCGCTGG TGTATGTGAG CGCGCTGTCG
GACTTCTTTA CGCAGGCATA CAACATCGGT GAGCGCGACG GCCGTATCGT CGAGCTGCTG
CTGTTTGCCG GCTTGTGCTA TTTCGTGATC TGCTTCGGCG CCTCCGTGCT GGTGAAGCGA
CTTCAGAAGA AGGTGACCCA ATGA
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| Protein sequence | MAYQFDFSSI NVDNMRVLGE GMLLSLEITG TAILVGIVWG TLLAMMRLSG IKPLQVFGQA
YVNLFRSIPL VMVLLWFFLI VPQVLQKIFN LSPATDMRMT SALVAFALFE AAYYSEIIRA
GIQSVSRGQM FAAYAMGMTY GQAMRLVILP QAFRNMIPLL LTQAIVLFQD TSLVYVSALS
DFFTQAYNIG ERDGRIVELL LFAGLCYFVI CFGASVLVKR LQKKVTQ
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