Gene Rpic12D_0361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0361 
Symbol 
ID8017985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp374385 
End bp376049 
Gene Length1665 bp 
Protein Length554 aa 
Translation table11 
GC content66% 
IMG OID644829140 
Productcoenzyme A transferase 
Protein accessionYP_002980339 
Protein GI241661979 
COG category[I] Lipid transport and metabolism 
COG ID[COG4670] Acyl CoA:acetate/3-ketoacid CoA transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGTCA TCACAACGGA TGCGGCCGCG CGCTTGGTGC AGCCGGGGTG GACGGTGGCC 
TGCGCGGGGT TTGTCGGCGC GGGCCATGCA GAGGCGGTCA CGCACGCGCT CGAGCGCCGG
TTCCTGACCA CCGGCGAACC GCGGGACCTT ACGCTCGTCT ACTCCGCCGG GCAGGGCGAT
CGCGCCACGC GCGGCGTCAA CCACTTCGGT AATCCCGGGA TGACGCGCTG CGTGGTGGGC
GGACATTGGC GCTCCGCCAC TCGATTAGCG GACCTGGCGC TCGCCGAGCA GTGCGATGCT
TTCAACCTGC CTCAAGGCGT GCTCACGCAT CTCTACCGCG CCATCGCGGG CGGCAAGCCC
GGTGTGCTGA CGAAGATGGG CCTGCACACC TTTGTCGACC CGCGCACGGA GCTTGACGCG
CGCTATCACG GTGGTGCTAT CAACAACCGC GCCAAGGCAG CGCGAGCTGC GGGTAAGGCG
TCGTGGGTCG AGTACGAGCG CTTTCGGGGC GAAGACTATC TCTTTTACCC GAGCTTCCCG
TTGCACTGCG TCTTCCTGCG CGGTACGGCT GCCGACCCAC GCGGCAACAT CAGCACGCAC
GAAGAAGCCT TTCACCACGA ACTGCTGGCC ATGGCGCAAG CTGCGCGCAA CTCCGGCGGC
ATCGTCATCG CGCAGGTGCG TCGGCTCGTC GATCGGCATG ACAACCTGCA GGCGATCCAC
GTGCCGGGCA TCCTCGTCGA CTACGTGGTC GTTGCTGACG ATGAAACCGA ACACCAGATG
ACCTTCGGCG AAGCGTTCAA TCGGGCCTAT ATCCGCCCTT GGCAAGGCGA GGCAATCCAG
CTCAAGGAAG ACGCCGTCGA AGCGAGCGAG GCGCTGGAGG CGAGCCAGCA CGGCGCGATG
GATGCCCGTA CGCTCGTGCA ACGCCGCGCT GTGCTGGAAC TGATCGCGCA GCAACCGCGG
GTCGTCAACC TCGGCGTGGG CATGCCCGCG GCCGTCGGCG CCCTGGCTGA ACAGGAGGGG
GCGCGCGGTT TCACACTGAC TGTGGAGGCC GGCCCCATTG GCGGTACGCC GGCAGATGGC
CTCAGCTTCG GCGCGTCGGC CTATCCCGAA GCGGTCGTGG ATCAGCCCGC GCAATTCGAC
TTCTACGAAG GGGGCGGCAT CGATCTCGCC ATCCTCGGAC TGGCGGAATT GGACGGCGCC
GGCAACGTCA ACGTCAGCCT GTTCGGCGAG GGCGGTGACA CCATCGTTGC GGGCGTGGGG
GGATTCATCA ACATCACGCA GAGCGCGCGC TCCGTCGTGT TCATGGGCAC ACTCACCGCC
GGCGGCCTCC AAGTCGAAGC CGAAGACGGC AAGCTGCGCA TCGTGCGCGA AGGGCGGCTC
AAGAAGATCG TGCCAGCGGT ATCGCACCTC ACCTTCAACG GGGAATATGC GGCCCGGTCG
GGCATTCCTG TGCGCTACGT GACCGAGCGC GCCGTCTTCG AGATGCGTGG CGATGGCCAC
GGCGCCCGGC GTCTCACTCT CACAGAAATC GCGCCCGGCA TCGACCTACA GCGGGACGTA
TTGGATCAAT GCGCCGCGGA CGTTGCCGTG GCAGCCGACC TCCGTGAAAT GGACGCGCGC
ATCTTTCGCC GCGGCGCCAT GTATGCCGGC ATCACGCCAG CCTGA
 
Protein sequence
MQVITTDAAA RLVQPGWTVA CAGFVGAGHA EAVTHALERR FLTTGEPRDL TLVYSAGQGD 
RATRGVNHFG NPGMTRCVVG GHWRSATRLA DLALAEQCDA FNLPQGVLTH LYRAIAGGKP
GVLTKMGLHT FVDPRTELDA RYHGGAINNR AKAARAAGKA SWVEYERFRG EDYLFYPSFP
LHCVFLRGTA ADPRGNISTH EEAFHHELLA MAQAARNSGG IVIAQVRRLV DRHDNLQAIH
VPGILVDYVV VADDETEHQM TFGEAFNRAY IRPWQGEAIQ LKEDAVEASE ALEASQHGAM
DARTLVQRRA VLELIAQQPR VVNLGVGMPA AVGALAEQEG ARGFTLTVEA GPIGGTPADG
LSFGASAYPE AVVDQPAQFD FYEGGGIDLA ILGLAELDGA GNVNVSLFGE GGDTIVAGVG
GFINITQSAR SVVFMGTLTA GGLQVEAEDG KLRIVREGRL KKIVPAVSHL TFNGEYAARS
GIPVRYVTER AVFEMRGDGH GARRLTLTEI APGIDLQRDV LDQCAADVAV AADLREMDAR
IFRRGAMYAG ITPA