Gene Rpic12D_0350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0350 
Symbol 
ID8017974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp362885 
End bp363547 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content68% 
IMG OID644829129 
ProductSterol-binding domain protein 
Protein accessionYP_002980328 
Protein GI241661968 
COG category[S] Function unknown 
COG ID[COG3165] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.502099 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCGA CAGCCACTTC GTCTCCGTCT TCGTTTCCGC TCGTGCTGAT GCAGCCGCTG 
CTGCTCGCGC TCAACCATCT GCTGCGCCAG GAGCCCTGGG CGCAGGAGAC GTTGCGGCCC
TTCGCAGGCC GCGTGGCGCG CTTTGACCTG GCGCCCATGT CGATGACGTT GCAGGTGGAC
GCCGCCGGCC TGGTGACCGC TCCCCCGCCT GATGTCGAAC CGGCTGTGAC CGTTGTCGTG
CCGCTCGCGG CCGCTGCCGG CGATTACGCC ACGGGCGGGC AGGCCGCCGT GCTCAAGCAC
GTGCGCATCG AGGGCGAGGC CGAGTTCGCC AACGTGTTGT CCACCCTGCT GCGCAATCTG
CGCTGGGATG CGGCGGAAGA TCTCTCGCGC CTGTTTGGCG ATGTCATCGC GCAGCGCATG
GTGAGCGGTG CGCAGGCCGC CCGCACTGAG GCCACGCGTG TCAGTCGTTC GCTGGCGGAA
TCGGTGGCGT CTTACCTCAC GGATGAGCAA CCGACGCTTG TCCGCCATGC GCGCCTTGCG
CAGTTCGCCG ACGATGTGGC CGCACTGCGT GACGCCGAAG CGCGTCTGGT CAAACGGCTG
GAGCGGCTCG AAAAACTTCC ACGACCGGCC ACCCGGATCG CACGTCAGGG TGAATCGGCA
TGA
 
Protein sequence
MSSTATSSPS SFPLVLMQPL LLALNHLLRQ EPWAQETLRP FAGRVARFDL APMSMTLQVD 
AAGLVTAPPP DVEPAVTVVV PLAAAAGDYA TGGQAAVLKH VRIEGEAEFA NVLSTLLRNL
RWDAAEDLSR LFGDVIAQRM VSGAQAARTE ATRVSRSLAE SVASYLTDEQ PTLVRHARLA
QFADDVAALR DAEARLVKRL ERLEKLPRPA TRIARQGESA