Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0348 |
Symbol | ubiE |
ID | 8017972 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 360834 |
End bp | 361565 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644829127 |
Product | ubiquinone/menaquinone biosynthesis methyltransferase |
Protein accession | YP_002980326 |
Protein GI | 241661966 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
TIGRFAM ID | [TIGR01934] ubiquinone/menaquinone biosynthesis methyltransferases |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.43472 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAAA CCCACTTCGG ATTTCAGCAG GTCGATGAGC AGGAAAAGGC CGGCAAGGTT GCCGGCGTGT TCCATTCCGT CGCGAGCAAA TACGACGTGA TGAACGACCT GATGTCCGGC GGCCTGCACC GCGTGTGGAA AATGTTCACC ATTGCCCAGG CAGCAGTGCG CCCGGGCTAC AAGGTGCTCG ACATCGCCGG CGGGACTGGT GATCTGGCCA AGGCCTTCGC GCGCCAGGCA GGTCCGACCG GCGAGGTCTG GCTGACCGAC ATCAACGAGT CGATGCTGCG CGTCGGCCGT GACCGGCTGC TCGATGCTGG CGTGCTCACC CCCACCGCCC TGTGCGACGC CGAGCACATT CCCTTTCCGA ATGCTTACTT CGATGTGGTG ACAGTGGCAT TCGGCTTGCG CAACATGACG CACAAGGATC GCGCGCTTGC TGAAATGCGC CGCGTGGTGA AGCCGGGCGG CAAGGTCATG GTGCTGGAGT TTTCCAAGGT GTGGCAGCCG CTGGAGAAGG CCTATGACCT GTACTCTTTC AAGGTACTGC CGTGGTTGGG CAGCAAAGTG GCGGGCGACC CCGAGAGCTA CCGCTATCTG GCCGAGTCCA TCCGCATGCA CCCGGATCAG GAAACGCTCA AGCAGATGAT GGAACAGGCC GGATTGGACT CGGTCGAATA CTTCAATCTG ACGGCGGGTG TCGTGGCTCT GCACGTCGGC CGTCGCCTTT AA
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Protein sequence | MSQTHFGFQQ VDEQEKAGKV AGVFHSVASK YDVMNDLMSG GLHRVWKMFT IAQAAVRPGY KVLDIAGGTG DLAKAFARQA GPTGEVWLTD INESMLRVGR DRLLDAGVLT PTALCDAEHI PFPNAYFDVV TVAFGLRNMT HKDRALAEMR RVVKPGGKVM VLEFSKVWQP LEKAYDLYSF KVLPWLGSKV AGDPESYRYL AESIRMHPDQ ETLKQMMEQA GLDSVEYFNL TAGVVALHVG RRL
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