Gene Rpic12D_0330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0330 
Symbol 
ID8017954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp338697 
End bp339668 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content66% 
IMG OID644829109 
ProductAlpha/beta hydrolase fold-3 domain protein 
Protein accessionYP_002980308 
Protein GI241661948 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTGGC AGAACTGGGT CGTCTCTAGG ATGGTGCGCA ACCAGATCAA GAAGCCGACC 
GAGCGGGAGC CGTTCGACCC TATCGCCACG CGCCTGCATG CCGAGAAGCG CAAGATGCCT
TCGCCGGTGG AATTGCCGCC GGATTGGCGC ATCGTCCCGG CCTTTGGGGC CAACAGCGGC
GCCCTTACCG GCGAATGGAT CGAACCCGCT GATCCAGACC TGCATGACGA CGCGCCCGTT
GTCCTGTATC TGCATGGCGG CGGCTATTTT TTCTGCAGCC CCCGCACACA TCGCCCGATC
ACCATTGGGC TTGCCACACA TGCGCGTGCC CGCGTATGCG TCCCGGACTA CCGGCTGGCA
CCCGAGCACC CGTTTCCCGC GCCGGTCGAA GATGCGCTGT TGACGTACCG CACGCTGCTG
GCACAGGGCG TGGCGCCATC GCGCATCGTG GTGGCGGGTG ACTCCGCGGG CGGCGGGCTG
GCGTTGGCGC TGCTGGTGGC CTTACGCGAT GCGGCCGATC CGCTGCCGGC GGGCGCCGTG
CTGTATTCGC CGTGGACGGA TCTTGCCGCC ACCGGCCAAA GCCTGATCGA AAACGATGAA
TCCGACGTGA TGTTTCGCGG AGCCTGGATG GCGCACGGTG CGGCGTTGTA CCTGGGCGAC
TCTGGGGCGC CGACGGACCA TCCGCTCGCC TCGCCGCTGT ATGCCGATTT CACGGGGCTG
CCGACGCTGC ACTGCTATGT CAGCACCAGC GAAGTGCTGC GCGACGACAC CCTCCGAATG
GCCGAGCGTG CGCGGGCGGC CGGGGTATCC GTTTCGGTAG AAATGGGGCG GCGGCTTCCG
CACGTGTGGC CGATCTTCTA TCCTTTCCTT CCAGAGGCGC GTGTAGCGCT CAAACGATCG
GGCGAGCAGA TCAGGCGACT GGTTGCCGCC CGGCACGAGA ACCGAGAACC GGTGGCACTG
ACGCCGGCAT GA
 
Protein sequence
MSWQNWVVSR MVRNQIKKPT EREPFDPIAT RLHAEKRKMP SPVELPPDWR IVPAFGANSG 
ALTGEWIEPA DPDLHDDAPV VLYLHGGGYF FCSPRTHRPI TIGLATHARA RVCVPDYRLA
PEHPFPAPVE DALLTYRTLL AQGVAPSRIV VAGDSAGGGL ALALLVALRD AADPLPAGAV
LYSPWTDLAA TGQSLIENDE SDVMFRGAWM AHGAALYLGD SGAPTDHPLA SPLYADFTGL
PTLHCYVSTS EVLRDDTLRM AERARAAGVS VSVEMGRRLP HVWPIFYPFL PEARVALKRS
GEQIRRLVAA RHENREPVAL TPA