Gene Rpic12D_0321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0321 
Symbol 
ID8017945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp331911 
End bp332585 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content66% 
IMG OID644829100 
Producthypothetical protein 
Protein accessionYP_002980299 
Protein GI241661939 
COG category[S] Function unknown 
COG ID[COG4648] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.828531 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCGAC TGACCAGCTT TGCGCGAGGC GCGGCGGGCG TGGGTGCGAT CGTGGCGTAT 
CAGGTCGGTG CGCATTACGC AGCGGCCACG CCGGGCGCGC ATGGCGTGGG CCTGGCAATG
GCGCTGTTAC CGCCGTTGGC AATCGCGCTG GTGGCGGCCA CACGTACCAC GCATCGTGCA
TGGCTGTTGC CGCTGTGGTT GCTCGTCTGC TCAGTGCTGT GGAGGGCGCG CGCGCCGCTG
GCAGCGCATT TTGACTGGGG CCTGTACCTC GAGCATGCAA GCTTCAACCT GATGATGGCC
TACGTGTTCG GCCGCACGCT GGTGGCGGGG CGCGAGCCGC TGTGCACGCA CTTTGCTCAC
ATGGTGCACG GCACGCTGAC GCCGCGCATT GCGCGTTACT CGCGGCAAGT CACGCTGGCG
TGGACGCTGT TTTTCCTGGT GACCGCCGCC GTATCCACGC TGCTGTTTGC CACGGCACCC
ACCGTCACGT GGTCGACGTT TGCGAACTAC CTGTCGCTGC CGCTGGTGGG CGTGATGTTC
GTGGCGGAAT ACCTATGCCG CCGCATCGTG CTGCGCGGCG AGCCACACTC CAGCCTGTTC
GATGCGGTGC GCGCTTATCG ACAATCGGAG CAATCCAGGC ACGCAACGCC CATCGCCACA
GAGCGCCCCC GCTGA
 
Protein sequence
MHRLTSFARG AAGVGAIVAY QVGAHYAAAT PGAHGVGLAM ALLPPLAIAL VAATRTTHRA 
WLLPLWLLVC SVLWRARAPL AAHFDWGLYL EHASFNLMMA YVFGRTLVAG REPLCTHFAH
MVHGTLTPRI ARYSRQVTLA WTLFFLVTAA VSTLLFATAP TVTWSTFANY LSLPLVGVMF
VAEYLCRRIV LRGEPHSSLF DAVRAYRQSE QSRHATPIAT ERPR