Gene Rpic12D_0308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0308 
Symbol 
ID8017932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp318884 
End bp319558 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content62% 
IMG OID644829087 
Productthiosulfate reductase cytochrome b subunit (membrane anchoring protein) 
Protein accessionYP_002980286 
Protein GI241661926 
COG category[C] Energy production and conversion 
COG ID[COG4117] Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.534278 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCG ACGCCCACCT CTCTATGCCC ACCAGCATCG ACACCAGTCC GGTGCATCCG 
TTGTGGATGC GCTGTACGCA CTGGTTCAAT GCCTTGGCAG TGATGGTGTT GGTGCTGAGC
GGTTGGCGCA TCTACAACGC TGCACCGTTC TTTCCATTCA CTATCCCAGC GTCCGCTACT
TTGGGCGGAT GGCTGGGAGG CGCGCTTCAG TGGCACTTCG CAGCGATGTG GTTGCTGGTG
GTCAACGGCT TGGTCTACCT AGTCATGAAT GTCGCCAGCG GCCGACTGGC CCGCAAATTT
TTCCCAGTCA CGCCGGCGGG TGTGCGGTGT GACATGGTCG CAGCGCTCAA GGGAAGGCTC
TCGCATGCCG ACCCGCGCCA CTACAACAAC GTGCAGCGGC TCGCCTATCT GTCGGTGATA
TTGGACATCG TGCTGTTGGT GCTTTCGGGC TTGGTACTGT GGAAGTCGGT GCAGTTCGCG
ACCCTGCGAG AGCTACTTGG TGGCTACGAG GTAGCTCGCC GCATCCACTT CTGCGCGATG
GCCGGCGCTG TGGCGTTCGT GGTGGTGCAC CTTGTGATGG TAGCTCTGGT GCCACGCACC
CTGCTGACGA TGTTAGGCGG CCGCGTCGCT GGCACCCCCT CCCCGATCCA GGACCGGTCG
TCGCACGACG CCTGA
 
Protein sequence
MKRDAHLSMP TSIDTSPVHP LWMRCTHWFN ALAVMVLVLS GWRIYNAAPF FPFTIPASAT 
LGGWLGGALQ WHFAAMWLLV VNGLVYLVMN VASGRLARKF FPVTPAGVRC DMVAALKGRL
SHADPRHYNN VQRLAYLSVI LDIVLLVLSG LVLWKSVQFA TLRELLGGYE VARRIHFCAM
AGAVAFVVVH LVMVALVPRT LLTMLGGRVA GTPSPIQDRS SHDA