| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0306 |
|---|
| Symbol | |
|---|
| ID | 8017930 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 316530 |
|---|
| End bp | 318026 |
|---|
| Gene Length | 1497 bp |
|---|
| Protein Length | 498 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644829085 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_002980284 |
|---|
| Protein GI | 241661924 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.290923 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGGAC GAGGGGAGGC AGTGCTATCT CGACGGCTCT CGCTGGTATT CGCTGTGCTG
TTGCTGGTGT GCTGCGGCAC TTCGGCTTGG CTGCAATTGC GCTCGAACGG ACGTCACGAG
CAGGAGGTGA TCCAACGCTT GTCGAGCGGG TTGGCCGCAC ACATCGCGGA GAATGCCGAA
CTGATGCGAC CGGAAGGACT AAACCCTGTC GCGGTGAAGG ATCTGTTCGA CAAACTGATG
GCGGTGAATC CTAGCGTAGA GGTCTACCTG CTCTCGCCTG ACGGCCACAT TGCGGCGCAA
GCGGCGCCCC CCGGCCACCT CAAGCGCGAC CGCGTCGACC TCGCGCCGGT GCGCAGACTG
CTCGCTGGTG CGACGATGCC GGTCCTCGGT GACGATCCAC GCAACTTGCA AACGCCCAAA
GTTTTTAGCG CCGCGCCGAT GCGCGTTGAT GGCCGAGACG CAGGTTACGT CTACGTGGTG
CTGCAGGGCG AGGACCACGA CGCCGTTGCC GCGCACGTGG CGGCTGACAA CGTTTTGCGG
ACAACGCTGT GGTCCATGGG GCTGGTGGCT CTTCTCGGGC TTGTAGCGGG CACGATGGCG
TTCTGGCTCA TCACGCGGCC TCTGCGCGAG CTGACGGCTG TAGTCCGACG CTTCGAATCC
GAAGGAATCG GATCGCTCGA AAGCCAAACG GCCACACTCG AGCGCATTGC GCGCGGTGGC
GGAGAAATAG CGACACTGAG CCAGGCCTTC GTGCAGATGA CGCGGCGCAT CGCTGAGCAG
TGGCGAGAGC TGACCCTGCA GGACCAGCAG CGCCGCGAAC TCGTCGCCAA TATCTCGCAT
GACCTGCGCA CGCCCCTGAC TTCACTACAC GGCTACCTGG AAACGCTCCG ACTGAAGGCC
GGTATCCTCG ACGACGAAGA GCGCCGCCGC TACCTCGACA TTGCGCTCGG TCAGAGCCGC
AAGGTTGGCC GGCTCGCACA GGAGCTATTT GAGCTAGCGC GGCTTGAGTA CGGCGTGGTT
AAGCCAGAAA AGGAAAATTT CGCGTTGGCC GACCTGGTAC AAGACGTGTT TCAGAAGTTC
GAGTTGGCAG CAGGGGCGCG TCAGCAACAA CTCAAGCCAG ACATTGCGCC CGGTCTACCC
ATCGTGTCGG CCGACTTGGG CATGATCGAG CGCGTGCTAA CAAACCTGCT CGACAACGCC
ATCCACCATA CGCCAGTAGG CGGCGCGATC GAGGTGCAGT TGCGTCCAAC GAACACTGGG
GTCGCGGTCC AGGTTAGCGA CACCGGGCCG GGTATCCCGG GTGAACTTCA GAAGGGACTC
TTCGTGCGTC CAGTGTTCAT GAGCGGTGCC CGCAGCGATG GCTCACGCAG CGGTGGGCTC
GGGCTGATGA TCGTGCAGCG AATCCTGCAG CTGCATGGCA GCGAAATCCG GCTGGTGCCG
CAGCCCGGAA AGGGTGCGGT GTTTCGCTTC CAGTTGGCGG GTGCCGCGAG TGGGTGA
|
|---|
| Protein sequence | MSGRGEAVLS RRLSLVFAVL LLVCCGTSAW LQLRSNGRHE QEVIQRLSSG LAAHIAENAE
LMRPEGLNPV AVKDLFDKLM AVNPSVEVYL LSPDGHIAAQ AAPPGHLKRD RVDLAPVRRL
LAGATMPVLG DDPRNLQTPK VFSAAPMRVD GRDAGYVYVV LQGEDHDAVA AHVAADNVLR
TTLWSMGLVA LLGLVAGTMA FWLITRPLRE LTAVVRRFES EGIGSLESQT ATLERIARGG
GEIATLSQAF VQMTRRIAEQ WRELTLQDQQ RRELVANISH DLRTPLTSLH GYLETLRLKA
GILDDEERRR YLDIALGQSR KVGRLAQELF ELARLEYGVV KPEKENFALA DLVQDVFQKF
ELAAGARQQQ LKPDIAPGLP IVSADLGMIE RVLTNLLDNA IHHTPVGGAI EVQLRPTNTG
VAVQVSDTGP GIPGELQKGL FVRPVFMSGA RSDGSRSGGL GLMIVQRILQ LHGSEIRLVP
QPGKGAVFRF QLAGAASG
|
|---|
| |