| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0292 |
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| Symbol | |
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| ID | 8017916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 302715 |
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| End bp | 303302 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644829072 |
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| Product | lipopolysaccharide transport periplasmic protein LptA |
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| Protein accession | YP_002980271 |
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| Protein GI | 241661911 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1934] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03002] lipopolysaccharide transport periplasmic protein LptA |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATT CCCTCCGTGC CGCCGGCCTC GCCATCGTCG CTGCGCTGCT GCTTCCGGCC
CTGCCCGCGC ACGCCGAACG CGCCGATCGC GACAAGCCCC TCGTACTCGA AGCCGATAAC
GCCAGCTACG ACGATCTGAA GCAGGTCTAT CACTTGACCG GCAACGTGGT GCTGACCAAG
GGCACCATGG TGCTGCGCTC CGACCAGGCC GATCTGCGGA CGGACCCAGA GGGCTACAAC
TACGCCGTCG CCACGTCCAA GCCCGGGAAC CTCGCCTTCA TTCGCCAGAA GCGGGACAAC
GTCGACGAAT ACATCCAGGG TTGGGGCGAG CGCATCGAAT ATGACGGCAA GCAAGAGATC
TCCAAGCTGA TCACGCGCGC GCGCATGGAG CGCCTGCAAG GCGCCACACA GCTCGACGAG
ATCCGCGGCG CCGTGATTAC GTATGACGGC CAGAAGGAGT TCTACACGGC CTCGGGTGGC
GCGGAAAATG CGACCGCCGC CAACCCGTCG GGCCGGGTGC GCGCGGTTCT AGCACCGCGC
ACCAGCACCC CCGCTGCACC GGCATCAAAC CCGGCCGCCA AGCCCTGA
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| Protein sequence | MTDSLRAAGL AIVAALLLPA LPAHAERADR DKPLVLEADN ASYDDLKQVY HLTGNVVLTK
GTMVLRSDQA DLRTDPEGYN YAVATSKPGN LAFIRQKRDN VDEYIQGWGE RIEYDGKQEI
SKLITRARME RLQGATQLDE IRGAVITYDG QKEFYTASGG AENATAANPS GRVRAVLAPR
TSTPAAPASN PAAKP
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