Gene Rpic12D_0284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0284 
Symbol 
ID8017908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp295778 
End bp296431 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content62% 
IMG OID644829064 
Productpeptidase S16 lon domain protein 
Protein accessionYP_002980263 
Protein GI241661903 
COG category[R] General function prediction only 
COG ID[COG2802] Uncharacterized protein, similar to the N-terminal domain of Lon protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGAAG ACATCGCTCT CTCTCCGTTC TCGCCGCTGC CGCCGCTGCC CACCGAGTTG 
CCGTTGTTTC CGTTGCACAC GGTGCTGTTT CCGGGCGGTC TTCTCCCGCT GCGCATTTTC
GAAGCCCGCT ACATGGACAT GGTGCGCACG TGCCTGCGCG ACAAGACGCC GTTCGGCGTC
TGCCTGATCG AGCGCGGCAA CGAGGTCGGC ACCACCGACA ACCCGACTGT CCCGGTTGAC
GTGGGCTGCA TTGCCCACAT CACCGAATGC GATATGGAGC AGCTCGGCCT GCTGATGATC
AAGGTGCGTG GCACGCAGCG CTTCAAGGTG CTTTCTTTCG AGACGACGCC CAACGGGCTC
ATGCGCGGCA CGGTCGAACC CATCGGCGCC GACGTGGAAG ACTGCAAAGG CGAACTCTTC
GACGATTGCG TGGGCGCCCT GCGCCGCATC ATCACGACGC TCGGCTCGCG CGAAGACGGC
AACATCCCGA TGGTCGAACC CTACGAGTGG AACAGCCCGA GCTGGGTCGC GAATCGGCTA
TGCGAGCTGC TGCCGGTGCC GCTCAAGGCC AAGCAGAAAT TGATGGAGCT GATGGACGCC
GGCATGCGCA TCGAGATTGT CCATCGCTAC ATGAAGCAGC ATCACATTCT GTGA
 
Protein sequence
MQEDIALSPF SPLPPLPTEL PLFPLHTVLF PGGLLPLRIF EARYMDMVRT CLRDKTPFGV 
CLIERGNEVG TTDNPTVPVD VGCIAHITEC DMEQLGLLMI KVRGTQRFKV LSFETTPNGL
MRGTVEPIGA DVEDCKGELF DDCVGALRRI ITTLGSREDG NIPMVEPYEW NSPSWVANRL
CELLPVPLKA KQKLMELMDA GMRIEIVHRY MKQHHIL