Gene Rpic12D_0275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0275 
Symbol 
ID8017898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp285134 
End bp285736 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content63% 
IMG OID644829054 
Productpeptidyl-tRNA hydrolase 
Protein accessionYP_002980254 
Protein GI241661894 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0193] Peptidyl-tRNA hydrolase 
TIGRFAM ID[TIGR00447] peptidyl-tRNA hydrolase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.613029 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAAC TCATCGTCGG CCTCGGCAAT CCGGGCGCCG AATATGCGGC GACGCGACAC 
AACGCCGGCT TCTGGCTGGT CGACCAACTC GCGCGCATGG GCAACGTGAC ACTGCGCAAC
GAGACGCGCT TTCACGGCTA TGCCGCGCGC GCTAACCTGT GGGGCAACGA GGTGTGGCTG
CTGCAGCCGC AAACCTTCAT GAACCGCTCC GGCCTGGCCA CCGTGGCACT GGCCCGCTTC
TACAAGGTCA TGCCCGATGA GATCCTGGTC GTGCACGATG AATTGGATTT GCCGCCCGGC
GCTGTCAAAC TCAAGCTCGG AGGCGGATCC GGTGGACACA ACGGCCTGAA GGACATTGCG
GCCCATCTGA CCACGCAGCA GTTCTGGCGA CTGCGGCTGG GCATCGGCCA TCCGCGCAAT
CTCTTGCCGC CGGGCACGGC AGCATCTGGC CAGCATGATG TCGCCAACTT CGTGCTCAAG
GCGCCTCGCA AGGAAGAGCA GGACCTCATC GACCGCGCGA TCGATCAAAG CCTGGATGCG
CTGCCCGAAT TGATTGCCGG CAACGCCGAA AAAGCCATGA TGCGCCTGCA CACGGCACGC
TGA
 
Protein sequence
MIKLIVGLGN PGAEYAATRH NAGFWLVDQL ARMGNVTLRN ETRFHGYAAR ANLWGNEVWL 
LQPQTFMNRS GLATVALARF YKVMPDEILV VHDELDLPPG AVKLKLGGGS GGHNGLKDIA
AHLTTQQFWR LRLGIGHPRN LLPPGTAASG QHDVANFVLK APRKEEQDLI DRAIDQSLDA
LPELIAGNAE KAMMRLHTAR