Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0275 |
Symbol | |
ID | 8017898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 285134 |
End bp | 285736 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644829054 |
Product | peptidyl-tRNA hydrolase |
Protein accession | YP_002980254 |
Protein GI | 241661894 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0193] Peptidyl-tRNA hydrolase |
TIGRFAM ID | [TIGR00447] peptidyl-tRNA hydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.613029 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAAAC TCATCGTCGG CCTCGGCAAT CCGGGCGCCG AATATGCGGC GACGCGACAC AACGCCGGCT TCTGGCTGGT CGACCAACTC GCGCGCATGG GCAACGTGAC ACTGCGCAAC GAGACGCGCT TTCACGGCTA TGCCGCGCGC GCTAACCTGT GGGGCAACGA GGTGTGGCTG CTGCAGCCGC AAACCTTCAT GAACCGCTCC GGCCTGGCCA CCGTGGCACT GGCCCGCTTC TACAAGGTCA TGCCCGATGA GATCCTGGTC GTGCACGATG AATTGGATTT GCCGCCCGGC GCTGTCAAAC TCAAGCTCGG AGGCGGATCC GGTGGACACA ACGGCCTGAA GGACATTGCG GCCCATCTGA CCACGCAGCA GTTCTGGCGA CTGCGGCTGG GCATCGGCCA TCCGCGCAAT CTCTTGCCGC CGGGCACGGC AGCATCTGGC CAGCATGATG TCGCCAACTT CGTGCTCAAG GCGCCTCGCA AGGAAGAGCA GGACCTCATC GACCGCGCGA TCGATCAAAG CCTGGATGCG CTGCCCGAAT TGATTGCCGG CAACGCCGAA AAAGCCATGA TGCGCCTGCA CACGGCACGC TGA
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Protein sequence | MIKLIVGLGN PGAEYAATRH NAGFWLVDQL ARMGNVTLRN ETRFHGYAAR ANLWGNEVWL LQPQTFMNRS GLATVALARF YKVMPDEILV VHDELDLPPG AVKLKLGGGS GGHNGLKDIA AHLTTQQFWR LRLGIGHPRN LLPPGTAASG QHDVANFVLK APRKEEQDLI DRAIDQSLDA LPELIAGNAE KAMMRLHTAR
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