| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0255 |
|---|
| Symbol | |
|---|
| ID | 8017878 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 266161 |
|---|
| End bp | 267411 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644829034 |
|---|
| Product | transposase mutator type |
|---|
| Protein accession | YP_002980234 |
|---|
| Protein GI | 241661874 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3328] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.531318 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCACGCA AACCGAAAGC CAAGCCGGCG GACCTGCCGG CGATCCCTGC CGAACTGCTT
GAGCAGTTCG GCAGCGGCCC GATGACGGCC GAAGCCATCA ACGCGGCGAC CCTGGCCCTC
AAGAAGGCCC TGATCGAACG GGCGCTGGGC GGCGAGATGA ATCACCATCT GGGCTACCCG
CCAGGTGCGT CCAAGCCGGC CACGGTGAGC AATCAGCGCA ACGGCACGGG CGCCAAGACG
GTGCTGACCG AGGGCGGCCC GATCCGCATC GAGGTACCGC GCGACCGTGA CGGCAGCTTC
GCGCCGCTGC TCATCCCCAA ACACGAACGA CGCTTCAAGG GCTTCGACGA CAAGATCGTC
GCCATGTATG CCCGGGGCAT GACCGTGCGC GAGATCCAGG GCTTCCTGCT GGAGCAATAT
GCGACGGACG TCTCGCCTGA GTTCATCAGC TCGGTCACCG ACGAGGTGAT GGCCGAAGTC
ACCGCCTGGC AGGCCCGGCC GCTCGATCCC ATGTACCCGG TGGTGTTCTT CGACGCGCTG
CGGGTCAAGA TCCGGGAGGA TGCCGTGGTG CGCAACAAGG CCGTCTATCT GGCGCTGGGG
GTTCTGCCCG ACGGCACGCG TGACATCCTG GGCCTGTGGA TCGAGAACAC CGAGGGTGCC
AAGTTCTGGA TGAAGGTGTT CAACGATCTC AAGACGCGCG GCGTGAACGA CATCCTGATC
GCCGTGACCG ACGGCCTCAA GGGCATGCCC GAGGCGCTGG CAGCTGTGTT CCCCGCGACC
ACGCTGCAGA CCTGCATCGT CCACCTGATC CGCAACAGCC TCGATTACGC GAGCTGGAAG
GACCGTCGTG CGCTGGCGGC CGCGATCAGG CCGATCTACA CAGCCCCGAG CGCAGAGGCC
GCGCAGGCCG AGCTTGAGGC GTTTGCCGAC GGCCCGTGGG GGCAGCGATA CCCCACCGTC
AGTGCCGCCT GGCGCAACGC CTGGGATCGC GTGATTCCGT TCTTTGCGTT CCCGCCGGCG
GTACGCAAGG TGATTTACAC GACGAACGCC ATCGAGAACA TCAACGCCCA ACTACGCAAG
ATCATCAAGA CCCGTGGCCA CTTCCCGAGC GACGAAGCAG CAACAAAACT CATCTGGCTG
GCACTGCGCA ACATCACGGC CGGTTGGAGC CGTGCCGCTC ACGACTGGAA GCAGGCGATG
AACCAGTTCG CTATCCTCTA CGCGGATCGA TTCGTTCGAC CGTCCGTGTG A
|
|---|
| Protein sequence | MPRKPKAKPA DLPAIPAELL EQFGSGPMTA EAINAATLAL KKALIERALG GEMNHHLGYP
PGASKPATVS NQRNGTGAKT VLTEGGPIRI EVPRDRDGSF APLLIPKHER RFKGFDDKIV
AMYARGMTVR EIQGFLLEQY ATDVSPEFIS SVTDEVMAEV TAWQARPLDP MYPVVFFDAL
RVKIREDAVV RNKAVYLALG VLPDGTRDIL GLWIENTEGA KFWMKVFNDL KTRGVNDILI
AVTDGLKGMP EALAAVFPAT TLQTCIVHLI RNSLDYASWK DRRALAAAIR PIYTAPSAEA
AQAELEAFAD GPWGQRYPTV SAAWRNAWDR VIPFFAFPPA VRKVIYTTNA IENINAQLRK
IIKTRGHFPS DEAATKLIWL ALRNITAGWS RAAHDWKQAM NQFAILYADR FVRPSV
|
|---|
| |