Gene Rpic12D_0244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0244 
Symbol 
ID8017867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp253840 
End bp254610 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content67% 
IMG OID644829024 
Productputative transmembrane cytochrome oxidase complex biogenesis factor transmembrane protein 
Protein accessionYP_002980224 
Protein GI241661864 
COG category[S] Function unknown 
COG ID[COG3346] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.581984 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0169307 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGC GCGTACCGAT GCGACGCTGG TTTGCGCCTG TGCCGATGTT GGCAGGTGTG 
GCGCTGATTG CGCTGACGTG CTCGCTGGGG CGTTGGCAGC TTTCGCGTGC GCACGAGCGC
ATCGAGCGCC AGGCCCGCAT CATGGCGCTG GAAAATGCGC CCGCCCAGCG CATCACAGCG
CAGCCCGTGA CAGCAGATTC AGTAATGTAC AGGCCGGTGC TGCTGCGTGG AACGTTCGAC
GTGGCGCACA CGGTGCTGCT CGAGAACCGC CCGCACGTCA CCAACGACGT ATCGCGCCCG
GGTTTCGAGG TGCTCATCCC GCTGAGGCTG GAAGGTGCGG GCGGGCGCGC CGTGTTGGTC
GATCGAGGCT GGCTGCCGCG TGATCCGGTG GACCGCACGC GCATCGCGCC GTACACCACG
CCGGCGGGCG AAGTGCAGGT CGAGGGGATG GCGGTGCCGC ATGCCAGCCG GGTCTTCAGT
CTGGGCAGCA AGGACGGCGC GGATGAAGTC GGCCAGCGAC TTAGGCAGAA TATCGACCTC
GACGCTTTCT CGCGCGAAAT CGGCGTGCCG CTCCAACCGT TCGTGGTGCA GCAGCAGTCC
GACGTGGAGG ACGGCCTGTT GCGCGATTGG CCGCGCGCAG ATCTGGGCGC CGAGCGCAAT
TACGGCTACG CGTTCCAATG GTTTGCGATG GCGGCGGCAG TGCTTGGGCT GATGGTCTTT
TACAGCGTGC GGCGTTATCG CCGCTTGGCG GGCCGCTCCG AGCCCGCCTG A
 
Protein sequence
MTERVPMRRW FAPVPMLAGV ALIALTCSLG RWQLSRAHER IERQARIMAL ENAPAQRITA 
QPVTADSVMY RPVLLRGTFD VAHTVLLENR PHVTNDVSRP GFEVLIPLRL EGAGGRAVLV
DRGWLPRDPV DRTRIAPYTT PAGEVQVEGM AVPHASRVFS LGSKDGADEV GQRLRQNIDL
DAFSREIGVP LQPFVVQQQS DVEDGLLRDW PRADLGAERN YGYAFQWFAM AAAVLGLMVF
YSVRRYRRLA GRSEPA