Gene Rpic12D_0242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0242 
Symbol 
ID8017865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp252574 
End bp253434 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content62% 
IMG OID644829022 
Productcytochrome c oxidase subunit III 
Protein accessionYP_002980222 
Protein GI241661862 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0155178 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCGA ATCGAGCAAA CGCTCCGTAC TACTTCGTGC CCGGGCCCTC GCGGCATCCG 
ATTACGGCAA GCCTCGGCCT GCTGATCGTG CTGTTGAGCT CCGCTGCATG GGTGAATGCC
CAGCCGTGGG CCCCGTGGAC GTTCCTGGTC GGCCTGCTGT GGTTCCTCTT TGTGCTGCGC
GCGTGGTTTG CGGACGCCAT CTCTGAATCC GAGACCGGCA AGTACGGCGA CCGCGTGGAT
GCCTCGTTCC GCTGGTCGAT GAGCTGGTTC ATCTTCTCGG AAGTGATGTT CTTCGCGGCG
TTCTTCGGCG CGCTGTTCTA TGCCCGAACG ATCGCCATGC CGTGGCTGGG CGATCTGAAC
AACAAGCTGC TGTGGCCCGA CTTCAACGCG CTGTGGCCGA ACGCCGGACC GGCCGGCACG
GTAGCGCCCT TCACAACGAT GGGGCCGTGG CCGATTCCGA CGATCAACAC GGCGCTGCTG
CTGACTTCTG GCGTGACTCT CACGTGGGCA CACCATGCGC TGCGTGAAGG CAAGCGTGCC
CAGGTCATCC AGGGCCTGCT GCTGACGATC CTCCTGGGCT TCACGTTCAT GGGCTTCCAG
GCGTTCGAAT ACATCCACGC CTATCACGAA CTGAACCTGA AGCTGACCTC GGGCATCTAC
GGTTCAACGT TCTTCTTGCT GACGGGCTTC CACGGCTTCC ACGTGACCAT GGGCGCCATC
ATGCTGTCGG TGGTGCTGGG GCGTGTGATC AAGGGCCACT TCACGCCGGA ACATCACTTC
GCTTTTGAAG GCGCTGCGTG GTACTGGCAC TTCGTGGACG TGGTGTGGCT CGGCTTGTAC
GTGGTGGTGT ACTGGCTGTA A
 
Protein sequence
MSANRANAPY YFVPGPSRHP ITASLGLLIV LLSSAAWVNA QPWAPWTFLV GLLWFLFVLR 
AWFADAISES ETGKYGDRVD ASFRWSMSWF IFSEVMFFAA FFGALFYART IAMPWLGDLN
NKLLWPDFNA LWPNAGPAGT VAPFTTMGPW PIPTINTALL LTSGVTLTWA HHALREGKRA
QVIQGLLLTI LLGFTFMGFQ AFEYIHAYHE LNLKLTSGIY GSTFFLLTGF HGFHVTMGAI
MLSVVLGRVI KGHFTPEHHF AFEGAAWYWH FVDVVWLGLY VVVYWL