Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0240 |
Symbol | |
ID | 8017863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 251660 |
End bp | 252268 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644829020 |
Product | cytochrome C oxidase assembly protein |
Protein accession | YP_002980220 |
Protein GI | 241661860 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3175] Cytochrome oxidase assembly factor |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0144291 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCACA CACCGGCGCA GCCGGATCCG ACCCAAAACG ACAAAGCGCT GGAGCGCGGT CTGAACCGCT CGATGCTCGG CAAGCTGGCC GTCGTGGTCG TGATCATGTT CGGCTTCGGC TACGCGATGG TGCCGCTGTA CAAGAAGATC TGCGAGATCA CGAACATCAA CGTGCTCAAC ACGCGCGATG AAGACGGCGG CGCGCTGCGC AACTCGCAGG TCGACAAGAC GCGCACGATC ACGGTGGAAT TCGATTCGAA CAGCCAGGGG CCGTTCCGCT TCCGCCCGGT CAAGAACAGC ATGGATGTGC ACCCTGGCGA GATCAGCCAG ATCGTCTACG AGGTGGTGAA CAAGGAGGGG CGTACGGTCG AGGCCCAGGC CATCCCGAGT TACGCGCCCA AGCAGGCAAC CGAGTTCTTC AAGAAGATCG AGTGTTTCTG TTTCAAGCAG CAGACGCTGA CGGCCAACGA ATCACGCGAG ATGCCGGTGG TGTTTGTGAT TGATCCGGAT CTTCCCAAGG ACGTGAAGAC GATCACCTTG TCCTACACTT TCTTTGAAAT CCACGCACCG TCAGCTATTG CGCCGGCGAT GCCGAACAAG GGAACGTGA
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Protein sequence | MSHTPAQPDP TQNDKALERG LNRSMLGKLA VVVVIMFGFG YAMVPLYKKI CEITNINVLN TRDEDGGALR NSQVDKTRTI TVEFDSNSQG PFRFRPVKNS MDVHPGEISQ IVYEVVNKEG RTVEAQAIPS YAPKQATEFF KKIECFCFKQ QTLTANESRE MPVVFVIDPD LPKDVKTITL SYTFFEIHAP SAIAPAMPNK GT
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