Gene Rpic12D_0240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0240 
Symbol 
ID8017863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp251660 
End bp252268 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content59% 
IMG OID644829020 
Productcytochrome C oxidase assembly protein 
Protein accessionYP_002980220 
Protein GI241661860 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3175] Cytochrome oxidase assembly factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0144291 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCACA CACCGGCGCA GCCGGATCCG ACCCAAAACG ACAAAGCGCT GGAGCGCGGT 
CTGAACCGCT CGATGCTCGG CAAGCTGGCC GTCGTGGTCG TGATCATGTT CGGCTTCGGC
TACGCGATGG TGCCGCTGTA CAAGAAGATC TGCGAGATCA CGAACATCAA CGTGCTCAAC
ACGCGCGATG AAGACGGCGG CGCGCTGCGC AACTCGCAGG TCGACAAGAC GCGCACGATC
ACGGTGGAAT TCGATTCGAA CAGCCAGGGG CCGTTCCGCT TCCGCCCGGT CAAGAACAGC
ATGGATGTGC ACCCTGGCGA GATCAGCCAG ATCGTCTACG AGGTGGTGAA CAAGGAGGGG
CGTACGGTCG AGGCCCAGGC CATCCCGAGT TACGCGCCCA AGCAGGCAAC CGAGTTCTTC
AAGAAGATCG AGTGTTTCTG TTTCAAGCAG CAGACGCTGA CGGCCAACGA ATCACGCGAG
ATGCCGGTGG TGTTTGTGAT TGATCCGGAT CTTCCCAAGG ACGTGAAGAC GATCACCTTG
TCCTACACTT TCTTTGAAAT CCACGCACCG TCAGCTATTG CGCCGGCGAT GCCGAACAAG
GGAACGTGA
 
Protein sequence
MSHTPAQPDP TQNDKALERG LNRSMLGKLA VVVVIMFGFG YAMVPLYKKI CEITNINVLN 
TRDEDGGALR NSQVDKTRTI TVEFDSNSQG PFRFRPVKNS MDVHPGEISQ IVYEVVNKEG
RTVEAQAIPS YAPKQATEFF KKIECFCFKQ QTLTANESRE MPVVFVIDPD LPKDVKTITL
SYTFFEIHAP SAIAPAMPNK GT