| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0238 |
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| Symbol | |
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| ID | 8017861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 249822 |
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| End bp | 251426 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644829018 |
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| Product | cytochrome c oxidase, subunit I |
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| Protein accession | YP_002980218 |
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| Protein GI | 241661858 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0213097 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCG CTGTTACGCA CCCGCAAGAT CACGCGCACG GTCACGGAGA CGACCACGCG
CACGACCATC CGCACGGCTG GCGCCGTTGG CTGTTCGCGA CCAACCACAA GGACATCGGT
ACGCTGTACC TGCTGTTCTC TTTCATGATG CTGCTCTCGG GCGGCACGCT GGCCCTGCTG
ATCCGCCTTG AGCTGTTCCA GCCCGGCCTG CAATTCTTCC ATCCGGAGCT GTTCAACCAG
TTCACCACGC TGCACGGCCT GATCATGGTG TTCGGCGCCA TCATGCCGGC CTTCGTGGGC
TTTGCGAACT GGATGATCCC GCTGCAGGTG GGTGCGTCCG ACATGGCCTT CGCGCGGATG
AACAACTTCA GCTTCTGGTT GCTGCCGCCT GCGGCGCTGC TGCTGGTGGG CTCGTTCTTC
GCACCGGGCG GCGCCACGGC GGCCGGCTGG ACGCTCTATG CGCCGCTGTC GGTGCAGATG
GGCCCCGGCA TGGACATGGC GATCTTCGCG ATCCACATCA TGGGCGCATC GTCGATCATG
GGCGCGATCA ACATCATCGT GACCATCCTC AACATGCGCG CGCCCGGCAT GACGCTGATG
AAGATGCCCA TGTTCTGCTG GACGTGGCTC ATCACGGCAT ACCTGCTGAT CGCCGTGATG
CCGGTGCTGG CGGGGGCGAT CACCATGGTG CTGACCGACC GCCACTTCGG CACGAGCTTC
TTCTCCGCAG CAGGCGGCGG TGATCCGGTG ATGTACCAGC ACATCTTCTG GTTCTTCGGA
CACCCCGAGG TGTACATCAT GATCTTGCCG GCGTTCGGCA TCATCAGCCA GATCGTGCCG
GCCTTCGCGC GCAAGCCCCT GTTCGGCTAC AGCTCGATGG TGTACGCCAC GGCGTCGATC
GCCATCCTGT CGTTCATCGT GTGGGCGCAC CACATGTTCA CGACCGGCAT GCCCGTCACT
GGTCAGCTGT TCTTCATGTA CGCGACGATG CTGATCGCGG TGCCGACCGG CGTGAAGATC
TTCAACTGGG TGGCCACGAT GTGGCGCGGC TCGATGACGT TCGAGACGCC GATGCTGTTT
GCCATTGGCT TCATTTTCGT GTTCACGGTG GGCGGCTTCA CGGGCCTGAT CCTGGCCGTA
GCCCCGATCG ATATCCAGCT GCAGGACACG TATTACGTGG TGGCGCACTT CCACTACGTG
CTGGTGGCCG GCTCGCTGTT CGCGCTGTTC GCGGGCTTCT ACTACTGGGG TCCGAAGTGG
TCGGGCTACA TGTACAGCGA GACACGCGGC AAGATCCACT TCTGGGGTTC GATGATCACC
TTCAACCTCA CGTTCTTCCC GATGCACTTC CTGGGCCTGG CCGGTATGCC GCGCCGCTAT
GCGGATTACC CGCAGCAGTT CGCCGATTTC AACGCCGTCG CGTCGATCGG TGCACTGGGT
TTCGGCTTGA TGCAGGTGTA TTTCTTCTTC TTCGTGGTGC TGCCGTCGTA CCGCGGTGGC
GAGAAGGCCG CCGACAAGCC GTGGGATGGC GCGGAAGGCC TGGAGTGGAC CGTGCCGTCG
CCGGCACCGT TCCACACCTT TGAAGAACCA CCGCACGTGA AGTAA
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| Protein sequence | MSTAVTHPQD HAHGHGDDHA HDHPHGWRRW LFATNHKDIG TLYLLFSFMM LLSGGTLALL
IRLELFQPGL QFFHPELFNQ FTTLHGLIMV FGAIMPAFVG FANWMIPLQV GASDMAFARM
NNFSFWLLPP AALLLVGSFF APGGATAAGW TLYAPLSVQM GPGMDMAIFA IHIMGASSIM
GAINIIVTIL NMRAPGMTLM KMPMFCWTWL ITAYLLIAVM PVLAGAITMV LTDRHFGTSF
FSAAGGGDPV MYQHIFWFFG HPEVYIMILP AFGIISQIVP AFARKPLFGY SSMVYATASI
AILSFIVWAH HMFTTGMPVT GQLFFMYATM LIAVPTGVKI FNWVATMWRG SMTFETPMLF
AIGFIFVFTV GGFTGLILAV APIDIQLQDT YYVVAHFHYV LVAGSLFALF AGFYYWGPKW
SGYMYSETRG KIHFWGSMIT FNLTFFPMHF LGLAGMPRRY ADYPQQFADF NAVASIGALG
FGLMQVYFFF FVVLPSYRGG EKAADKPWDG AEGLEWTVPS PAPFHTFEEP PHVK
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