| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0232 |
|---|
| Symbol | gpsA |
|---|
| ID | 8017855 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 244489 |
|---|
| End bp | 245520 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644829012 |
|---|
| Product | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase |
|---|
| Protein accession | YP_002980212 |
|---|
| Protein GI | 241661852 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0240] Glycerol-3-phosphate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0120794 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAACA CGCGCATGCG AATTTCTGTT TTGGGTGCCG GTGCCTGGGG CACTGCCCTC
GCCAGCCACG CCGCGCAATC GCACGACGTC GTGCTGTGGG GGCGTGACGC GAGCCTGGTC
TCGCAAATGG CCGCCACGCA CATGAACGCG CCGTATCTGC CAGGCATCGC GTTGCAGGCG
TCGTTGCATT TTTCCGCTGA GTTGCAGGGC GCGCTCGACC ATGCGGCGGG CGACGACGCG
CTTGCCGTCA TTGCCTCACC CGTCGCGGGG CTGGCCGATC TCGCGCGCAC GATTGCCGCG
CACGGCGGTG TGCGCAACCT GATCTGGCTA TGCAAGGGTT TCGACCCGGA GACCAGCGCG
CTGCCGCACG CCATCGTGGC CGATGTGCTG AAGGCGTCGG GCCGCACCGA CCTCGCTGTC
GGTGTGCTGT CGGGGCCGAG TTTCGCCAAG GAGGTCGCGC AGGGTTTGCC GTGCGCCATG
ACGGTCGCTT CGACCAGTGC GACACTGTGC AAGCTGACAC AGCGCGGTTT TCACCATCAC
GCGATGCGCG TGTACGCCAG CGACGACCTC GTCGGTGTGG AAGTGGGCGG TGCCGTCAAA
AACGTCCTGG CCATTGCGAC AGGTGCGGCA GACGGGTTGG GCCTAGGGTT GAACGCACGT
GCCGCACTGG TCACGCGCGG GCTGGCAGAG ATGACGCGCC TGGGTCTGGC GCTCGGCGGT
CGGCCGGAAA CCTTCATGGG GCTGACCGGC ATGGGCGATC TGCTGCTGAC CGCCACCGGT
GATCTGTCAC GCAACCGCAC GGTCGGGATG CAGCTTGCGC AGGGCCGCTC GCTCGACGAC
ATCCTGCACA GCCTCGGTCA CGTCGCCGAA GGCGTGCGTT GTGCGCGTGC CGTTGCGGCG
CTCGCGCGCG CCAAGGGCGT GGACATGCCG ATCACCTTCA CCGTCTGCGA AGTCCTGTTC
GAAGGGCTTC CTGCTGCGAA AGCGGTGGAA CGTCTGCTAC AGCGCGACGC CAAATCCGAA
TCGACGCGTT AA
|
|---|
| Protein sequence | MLNTRMRISV LGAGAWGTAL ASHAAQSHDV VLWGRDASLV SQMAATHMNA PYLPGIALQA
SLHFSAELQG ALDHAAGDDA LAVIASPVAG LADLARTIAA HGGVRNLIWL CKGFDPETSA
LPHAIVADVL KASGRTDLAV GVLSGPSFAK EVAQGLPCAM TVASTSATLC KLTQRGFHHH
AMRVYASDDL VGVEVGGAVK NVLAIATGAA DGLGLGLNAR AALVTRGLAE MTRLGLALGG
RPETFMGLTG MGDLLLTATG DLSRNRTVGM QLAQGRSLDD ILHSLGHVAE GVRCARAVAA
LARAKGVDMP ITFTVCEVLF EGLPAAKAVE RLLQRDAKSE STR
|
|---|
| |